RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 SLC27A6Q9Y2P4 619 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 PDE4DIPQ5VU43 2346 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 RB1P06400 928 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 PPP5CP53041 499 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 ZNF404Q494X3 552 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 KRT78Q8N1N4 520 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 STX19Q8N4C7 294 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 TMIEQ8NEW7 156 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 LRRC3BQ96PB8 259 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 IL17FQ96PD4 163 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 MAPKAP1Q9BPZ7 522 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 NLNQ9BYT8 704 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 OR52A5Q9H2C5 316 aa20.64■□□□□ 0.89
SH2D3A-201ENST00000245908 TCF20Q9UGU0 1960 aaKnown RBP20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 HOXC11O43248 304 aaPredicted RBP20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 CEBPBP17676 345 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 VEGFBP49765 207 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 PLEKHG7Q6ZR37 379 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 FAM83HQ6ZRV2 1179 aaPredicted RBP20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 ING5Q8WYH8 240 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 NXPE3Q969Y0 559 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 PDXPQ96GD0 296 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 PPP1R16AQ96I34 528 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 A3GALT2U3KPV4 340 aa20.63■□□□□ 0.89
SH2D3A-201ENST00000245908 VEGFDO43915 354 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 MMP20O60882 483 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 RPLP0P05388 317 aaKnown RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 CD40LGP29965 261 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 EIF2DP41214 584 aaKnown RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 ST3GAL4Q11206 333 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 GANABQ14697 944 aaKnown RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 REEP3Q6NUK4 255 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 C11orf96Q7Z7L8 435 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 RAD51AP1Q96B01 352 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 CRELD1Q96HD1 420 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 AHSPQ9NZD4 102 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 FTSJ1Q9UET6 329 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 KCND3Q9UK17 655 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 LZTS3O60299 673 aaPredicted RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 PTHP01270 115 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 IFNW1P05000 195 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 KELP23276 732 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 CDC42P60953 191 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 PTGES3Q15185 160 aaKnown RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 LRRC26Q2I0M4 334 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 C9orf64Q5T6V5 341 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 GRASPQ7Z6J2 395 aaPredicted RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 AQP11Q8NBQ7 271 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 PSMA8Q8TAA3 256 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 OR8D1Q8WZ84 308 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 GTPBP3Q969Y2 492 aaKnown RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 ASF1AQ9Y294 204 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 PCDHGA3Q9Y5H0 932 aa20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 NUP210Q8TEM1 1887 aaPredicted RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 MUC22E2RYF6 1773 aaPredicted RBP20.62■□□□□ 0.89
SH2D3A-201ENST00000245908 ZAR1LA6NP61 321 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 ADRB3P13945 408 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 POU2F1P14859 743 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 GRK5P34947 590 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 MESP2Q0VG99 397 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 SELENBP1Q13228 472 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 SAXO2Q658L1 398 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 PDZD3Q86UT5 571 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 C9orf43Q8TAL5 461 aaPredicted RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 APOBEC4Q8WW27 367 aaKnown RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 NEURL3Q96EH8 262 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 NXF2Q9GZY0 626 aaKnown RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 MS4A12Q9NXJ0 267 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 PLAGL1Q9UM63 463 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 IFT52Q9Y366 437 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 PLXND1Q9Y4D7 1925 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 PRRT4C9JH25 899 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 M0R129 80 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 PLK4O00444 970 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 PLPP1O14494 284 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 TBX19O60806 448 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 SEMA3DO95025 777 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 TBX6O95947 436 aaPredicted RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 HNRNPA1P09651 372 aaKnown RBP eCLIP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 DDCP20711 480 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 LIMK1P53667 647 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 DUSP7Q16829 419 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 HNRNPA1L2Q32P51 320 aaKnown RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 C6orf183Q5T699 404 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 ZNF770Q6IQ21 691 aaPredicted RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 TUBA3EQ6PEY2 450 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 KLHL17Q6TDP4 642 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 B3GNT7Q8NFL0 401 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 OR5AR1Q8NGP9 310 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 ZNF717Q9BY31 904 aaPredicted RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 RHBGQ9H310 441 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 NMNAT1Q9HAN9 279 aaPredicted RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 A4GALTQ9NPC4 353 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 SLC6A14Q9UN76 642 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 SNX8Q9Y5X2 465 aa20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 CFAP20Q9Y6A4 193 aaKnown RBP20.61■□□□□ 0.89
SH2D3A-201ENST00000245908 SH3D21A4FU49 640 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 ADH1CP00326 375 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 EPCAMP16422 314 aa20.6■□□□□ 0.89
SH2D3A-201ENST00000245908 PUM1Q14671 1186 aaKnown RBP eCLIP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms