RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 TRAV6A0A075B6T7 132 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 IFNA14P01570 189 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 LAMP1P11279 417 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PKLRP30613 574 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 MLLT3P42568 568 aaPredicted RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 SELENOWP63302 87 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PSPHP78330 225 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 KCNJ10P78508 379 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 VEZF1Q14119 521 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 GPR19Q15760 415 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 SPOUT1Q5T280 376 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 C22orf42Q6IC83 251 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ARSKQ6UWY0 536 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ZNF767PQ75MW2 155 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PTOV1Q86YD1 416 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 C10orf53Q8N6V4 93 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 GPR156Q8NFN8 814 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 USP7Q93009 1102 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ANKRA2Q9H9E1 313 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 NDUFAF4Q9P032 175 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 COPZ2Q9P299 210 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TMPRSS11EQ9UL52 423 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 RAB23Q9ULC3 237 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 STUB1Q9UNE7 303 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 CORO2BQ9UQ03 480 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 SLC22A14Q9Y267 594 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 HCN4Q9Y3Q4 1203 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 DISC1C4P0D8 188 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 L7N2F9 121 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 FZD9O00144 591 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 SOX14O95416 240 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PROS1P07225 676 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PTX3P26022 381 aaPredicted RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 MAP2K3P46734 347 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 OR1G1P47890 313 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 MRPS6P82932 125 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 CHIT1Q13231 466 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TUSC3Q13454 348 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 FRG2Q64ET8 278 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TRIM40Q6P9F5 258 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 DENND1CQ8IV53 801 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 FAM20CQ8IXL6 584 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ATP6V1C2Q8NEY4 427 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 SLC5A11Q8WWX8 675 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 MAFIPQ8WZ33 124 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 MYEOVQ96EZ4 313 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 FRG2BQ96QU4 278 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TSNAXQ99598 290 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 RAD9AQ99638 391 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TM6SF2Q9BZW4 377 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ZNF304Q9HCX3 659 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 KCTD5Q9NXV2 234 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PADI2Q9Y2J8 665 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 IGLV3-10A0A075B6K4 115 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 M0R233 179 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PCDH17O14917 1159 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TXNL1O43396 289 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 TP53P04637 393 aaPredicted RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PPIBP23284 216 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 HOXC5Q00444 222 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 BOP1Q14137 746 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 LARS2Q15031 903 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 C21orf62-AS1Q17RA5 79 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 HKDC1Q2TB90 917 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 KHDRBS2Q5VWX1 349 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 RNF219Q5W0B1 726 aaPredicted RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 CXorf57Q6NSI4 855 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 GDPD1Q8N9F7 314 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 KLHDC9Q8NEP7 349 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 LKAAEAR1Q8TD35 194 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 FAM193BQ96PV7 902 aaPredicted RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 GAL3ST1Q99999 423 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 MAPKAP1Q9BPZ7 522 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 BHLHE41Q9C0J9 482 aaPredicted RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ZNF408Q9H9D4 720 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 FAM120CQ9NX05 1096 aaKnown RBP8.88□□□□□ -0.99
SRSF6-201ENST00000244020 ASIC5Q9NY37 505 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 HCN3Q9P1Z3 774 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 CLEC2DQ9UHP7 191 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 PCDHGA2Q9Y5H1 932 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 NUMA1Q14980 2115 aa8.88□□□□□ -0.99
SRSF6-201ENST00000244020 DRGXA6NNA5 263 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 B8ZZF3 427 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 J3KTA2 159 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 M0R036 132 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 IRF1P10914 325 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 ZNF14P17017 642 aaPredicted RBP8.87□□□□□ -0.99
SRSF6-201ENST00000244020 CBLP22681 906 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 CSTF2P33240 577 aaKnown RBP eCLIP8.87□□□□□ -0.998e-8■■■■□ 24.9
SRSF6-201ENST00000244020 CPT1AP50416 773 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 NKX3-2P78367 333 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 PCDH1Q08174 1060 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 HYAL2Q12891 473 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 ASAH1Q13510 395 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 ZNF79Q15937 498 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 SSX1Q16384 188 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 PTCHD3Q3KNS1 767 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 SLC35F1Q5T1Q4 408 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 ARMC12Q5T9G4 340 aa8.87□□□□□ -0.99
SRSF6-201ENST00000244020 MLIPQ5VWP3 458 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms