RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CLCN7P51798 805 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 DLX5P56178 289 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 PLGLB1Q02325 96 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 RELAQ04206 551 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 DEFB134Q4QY38 66 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 CAPN13Q6MZZ7 669 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 C16orf47Q6ZP98 133 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 UBE2R2Q712K3 238 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 TBC1D1Q86TI0 1168 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 CLYBLQ8N0X4 340 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 CYP4Z2PQ8N1L4 340 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 NKAPQ8N5F7 415 aaKnown RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 TMEM156Q8N614 296 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 POGLUT1Q8NBL1 392 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 CD200R1Q8TD46 325 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 ACMSDQ8TDX5 336 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 TBC1D20Q96BZ9 403 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 PGM2Q96G03 612 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 TSNARE1Q96NA8 513 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 ATG10Q9H0Y0 220 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 CXXC4Q9H2H0 198 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 CAB39LQ9H9S4 337 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 LIN28AQ9H9Z2 209 aaKnown RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF358Q9NW07 568 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 FBXW2Q9UKT8 454 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 HMX2A2RU54 273 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 FAM221AA4D161 298 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 TMEM200CA6NKL6 621 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 G3V3Y1 287 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 CHST10O43529 356 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ZBTB14O43829 449 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ALDOAP04075 364 aaKnown RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 CDH1P12830 882 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF37AP17032 561 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 HNF4AP41235 474 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 MAGEA12P43365 314 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 CMC1Q7Z7K0 106 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 MZB1Q8WU39 189 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 TM4SF19Q96DZ7 209 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 MED16Q9Y2X0 877 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 FLNAP21333 2647 aaKnown RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 KCNE1BA0A087WTH5 132 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 A0A096LPK6 155 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 SAGE2PA6NJ88 616 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 NDUFS4O43181 175 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 CTAG2O75638 210 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 SASH3O75995 380 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 DNASE1P24855 282 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 DGKQP52824 942 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 IL2P60568 153 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 PPIAP62937 165 aaKnown RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 TIAL1Q01085 375 aaKnown RBP eCLIP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 LTBQ06643 244 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF460Q14592 562 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 GXYLT1Q4G148 440 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 PAQR3Q6TCH7 311 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ACAD11Q709F0 780 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 WDR53Q7Z5U6 358 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 TRABD2AQ86V40 505 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 C17orf64Q86WR6 236 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 LIX1LQ8IVB5 337 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 CPNE9Q8IYJ1 553 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 MYO1HQ8N1T3 1032 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF740Q8NDX6 193 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 C16orf52Q8NHV5 167 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ASB11Q8WXH4 323 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 RMND5BQ96G75 393 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 OR1F2PQ96R84 312 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 SLC6A16Q9GZN6 736 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 VPS11Q9H270 941 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 CLEC4MQ9H2X3 399 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-201ENST00000242776 TMBIM4Q9HC24 238 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 NECTIN3Q9NQS3 549 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 DEPPQ9NTK1 212 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ALKBH4Q9NXW9 302 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ERVK-11Q9UQG0 969 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 ACOT9Q9Y305 439 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 L3MBTL1Q9Y468 752 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 LIPGQ9Y5X9 500 aa12.85□□□□□ -0.35
DDX39A-201ENST00000242776 A0A0G2JMM0 328 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 A0A1W2PPB8 328 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 A0A1W2PRS3 328 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 KIR3DP1A8MWS1 328 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 PROM1O43490 865 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 OR1F1O43749 312 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 ITGA10O75578 1167 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 C2P06681 752 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 SLC35E2BP0CK96 405 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 MPC1LP0DKB6 136 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 JAK1P23458 1154 aa12.84□□□□□ -0.35
DDX39A-201ENST00000242776 TRHRP34981 398 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-201ENST00000242776 NAE1Q13564 534 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms