RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 HPS6Q86YV9 775 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 NUDCD3Q8IVD9 361 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 KIRREL3Q8IZU9 778 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 ACOT4Q8N9L9 421 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 OR5T3Q8NGG3 340 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 AGAP11Q8TF27 550 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 MTFMTQ96DP5 389 aaKnown RBP10.62□□□□□ -0.71
SF3B6-201ENST00000233468 PTCHD1Q96NR3 888 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 TUBB6Q9BUF5 446 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 VN1R1Q9GZP7 353 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 ACBD3Q9H3P7 528 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 GSTO2Q9H4Y5 243 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 VIPAS39Q9H9C1 493 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 WDR41Q9HAD4 459 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 PFDN4Q9NQP4 134 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 SLC17A7Q9P2U7 560 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 VPS29Q9UBQ0 182 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 FBXL4Q9UKA2 621 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 ADAM29Q9UKF5 820 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 DAPP1Q9UN19 280 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 SLC12A4Q9UP95 1085 aa10.62□□□□□ -0.71
SF3B6-201ENST00000233468 LOC102723996A0A087X1L8 192 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 A0A0G2JN53 185 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 A0A1W2PQ72 361 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 SAP18O00422 153 aaKnown RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 MANBAO00462 879 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 PPP6CO00743 305 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 SH3BGRLO75368 114 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 CDC123O75794 336 aaPredicted RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 PDYNP01213 254 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 BPGMP07738 259 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 UROSP10746 265 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 CPN2P22792 545 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 CERS1P27544 350 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 ALDH3A1P30838 453 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 SLC18A1P54219 525 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 LIM2P55344 173 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 SOX8P57073 446 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 SLAMF1Q13291 335 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 ABRAXAS2Q15018 415 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 IMPG1Q17R60 797 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 HHATQ5VTY9 493 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 RIPOR1Q6ZS17 1223 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 CPEB2Q7Z5Q1 589 aaKnown RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 GPR180Q86V85 440 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 GALNT16Q8N428 558 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 OR11G2Q8NGC1 345 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 C9orf43Q8TAL5 461 aaPredicted RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 TM9SF4Q92544 642 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 LPAR4Q99677 370 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 SLC25A23Q9BV35 468 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 GATA5Q9BWX5 397 aaPredicted RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 AICDAQ9GZX7 198 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 ZNF700Q9H0M5 742 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 C12orf65Q9H3J6 166 aaKnown RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 DDX31Q9H8H2 851 aaKnown RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 TMBIM4Q9HC24 238 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 PRTFDC1Q9NRG1 225 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 LANCL2Q9NS86 450 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 NKIRAS1Q9NYS0 192 aa10.61□□□□□ -0.71
SF3B6-201ENST00000233468 PCDHGA9Q9Y5G4 932 aaKnown RBP10.61□□□□□ -0.71
SF3B6-201ENST00000233468 IGHV1-45A0A0A0MS14 117 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 SERTM1A2A2V5 107 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 K7EM74 188 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 RTCAO00442 366 aaKnown RBP10.6□□□□□ -0.71
SF3B6-201ENST00000233468 PLPP1O14494 284 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 DYRK3O43781 588 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 CTNSO60931 367 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 JRKO75564 520 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 B3GALT4O96024 378 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 H2AFXP16104 143 aaPredicted RBP10.6□□□□□ -0.71
SF3B6-201ENST00000233468 CREB1P16220 341 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 NR1D1P20393 614 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 GRK2P25098 689 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 ITGA3P26006 1051 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 ETV4P43268 484 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 SERPINB4P48594 390 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 PGDP52209 483 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 OR4D2P58180 307 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 MAGOHP61326 146 aaKnown RBP10.6□□□□□ -0.71
SF3B6-201ENST00000233468 RHAGQ02094 409 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 STX4Q12846 297 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 SLC13A2Q13183 592 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 RUNX2Q13950 521 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 SERTAD2Q14140 314 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 EXT1Q16394 746 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 SPIN4Q56A73 249 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 CCNYL2Q5T2Q4 361 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 AGBL2Q5U5Z8 902 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 FAAH2Q6GMR7 532 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 JMJD6Q6NYC1 403 aaPredicted RBP10.6□□□□□ -0.71
SF3B6-201ENST00000233468 UBE3DQ7Z6J8 389 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 CUZD1Q86UP6 607 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 KBTBD2Q8IY47 623 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 METTL4Q8N3J2 472 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 TANKQ92844 425 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 METTL2AQ96IZ6 378 aaKnown RBP10.6□□□□□ -0.71
SF3B6-201ENST00000233468 CCT7Q99832 543 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 RBCK1Q9BYM8 510 aa10.6□□□□□ -0.71
SF3B6-201ENST00000233468 LHPPQ9H008 270 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms