RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LSM14AQ8ND56 463 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DIRAS2Q96HU8 199 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SCLYQ96I15 445 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM129BQ96TA1 746 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ELAC1Q9H777 363 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PAK6Q9NQU5 681 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 STARD7Q9NQZ5 370 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DNAJC11Q9NVH1 559 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPR83Q9NYM4 423 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 VPS29Q9UBQ0 182 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC23A1Q9UHI7 598 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 UNC80Q8N2C7 3258 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DNAH14Q0VDD8 3507 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF106Q9H2Y7 1883 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ARPC4-TTLL3A0A0A6YYG9 625 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR2AG2A6NM03 316 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 C9P02748 559 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GBAP04062 536 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CBSLP0DN79 551 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 POU2F1P14859 743 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SELPP16109 830 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 MAPK1P28482 360 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SERPINA4P29622 427 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CBSP35520 551 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SOX9P48436 509 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PPP3CCP48454 512 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 TSTQ16762 297 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 HKDC1Q2TB90 917 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 XKR6Q5GH73 641 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ANGPTL8Q6UXH0 198 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 TPRG1Q6ZUI0 275 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CBARPQ8N350 705 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPR156Q8NFN8 814 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR2AP1Q8NGE2 309 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPPL2AQ8TCT8 520 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMEM203Q969S6 136 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SCRN2Q96FV2 425 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 HRASLS5Q96KN8 279 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SAMD11Q96NU1 681 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SORBS1Q9BX66 1292 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM83DQ9H4H8 585 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 MKLN1Q9UL63 735 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SPATA2Q9UM82 520 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM240BA0A1B0GVZ2 78 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PRAMEF25A6NGN4 478 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DSCR3O14972 297 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 C1SP09871 688 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR56A5P0C7T3 313 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 JUPP14923 745 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GJA1P17302 382 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SSTR2P30874 369 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PRIM2P49643 509 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 RAE1P78406 368 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SRSF11Q05519 484 aaKnown RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SCN1BQ07699 218 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ABRQ12979 859 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DOC2AQ14183 400 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 COX20Q5RI15 118 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 FAM109BQ6ICB4 259 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PGBD3Q8N328 593 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC5A8Q8N695 610 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CSGALNACT1Q8TDX6 532 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GGHQ92820 318 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PITX2Q99697 317 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DUSP26Q9BV47 211 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 DPCDQ9BVM2 203 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMEM121BQ9BXQ6 578 aaPredicted RBP9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ACOXLQ9NUZ1 547 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 GPATCH2Q9NW75 528 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 MCUBQ9NWR8 336 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 ING3Q9NXR8 418 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 NLKQ9UBE8 527 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 PCDHB11Q9Y5F2 797 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 KCNE2Q9Y6J6 123 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 SCN5AQ14524 2016 aa9□□□□□ -0.97
HLA-DOA-201ENST00000229829 CLDN24A6NM45 220 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 LEUTXA8MZ59 168 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 GFYI3L273 518 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 J3KTA2 159 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 ABLIM3O94929 683 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 IGSF6O95976 241 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 SRCP12931 536 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 GALEQ14376 348 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 GRM7Q14831 915 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 CLVS2Q5SYC1 327 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 Q6ZNB5 142 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 KCTD20Q7Z5Y7 419 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 TMCO2Q7Z6W1 182 aaPredicted RBP8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 LAX1Q8IWV1 398 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 C1orf52Q8N6N3 182 aaKnown RBP8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 SLAIN1Q8ND83 568 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 C19orf18Q8NEA5 215 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR4K1Q8NGD4 311 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 OR8J2Q8NGG1 315 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 WDR20Q8TBZ3 569 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 MED8Q96G25 268 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 NIPSNAP1Q9BPW8 284 aa8.99□□□□□ -0.97
HLA-DOA-201ENST00000229829 SMG9Q9H0W8 520 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms