RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 PCSK2P16519 638 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 ZNF7P17097 686 aaPredicted RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 POU1F1P28069 291 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 BOP1Q14137 746 aaKnown RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 C22orf42Q6IC83 251 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 FRMPD2BQ6IN97 320 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 KCTD20Q7Z5Y7 419 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 NAGSQ8N159 534 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 ZBTB2Q8N680 514 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 NANOGP1Q8N7R0 232 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 AQP11Q8NBQ7 271 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 OR8J2Q8NGG1 315 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 MARVELD1Q9BSK0 173 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 SPON2Q9BUD6 331 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 MARCH5Q9NX47 278 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 ENOPH1Q9UHY7 261 aa16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 DNMT3AQ9Y6K1 912 aaPredicted RBP16.91■□□□□ 0.3
CDKN1B-201ENST00000228872 SMIM30A4D0T7 59 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 I3L521 148 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 BTN3A3O00478 584 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 ORC5O43913 435 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 PCDH7O60245 1069 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 RFPL3O75679 317 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 ZNF250P15622 560 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC11A1P49279 550 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 DGKEP52429 567 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 RAB25P57735 213 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 ABATP80404 500 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 MRPL58Q14197 206 aaKnown RBP16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 NFE2L1Q14494 772 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 PAQR6Q6TCH4 344 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 SERPINA9Q86WD7 417 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 SDR16C5Q8N3Y7 309 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 Q8N402 240 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 CLDN19Q8N6F1 224 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 CDC26Q8NHZ8 85 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 PIH1D2Q8WWB5 315 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 VWCEQ96DN2 955 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC32A1Q9H598 525 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 RDH14Q9HBH5 336 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 C11orf16Q9NQ32 467 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 THSD1Q9NS62 852 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 ACER3Q9NUN7 267 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 DNAJC27Q9NZQ0 273 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 RABL2BQ9UNT1 228 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 COL4A6Q14031 1691 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 NPIPB8E9PQR5 432 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 PRMT3O60678 531 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 ETV3P41162 512 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 LIMS1P48059 325 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 GAB1Q13480 694 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 NCF4Q15080 339 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 TEAD4Q15561 434 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 GGTA1PQ4G0N0 100 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 TMEM65Q6PI78 240 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 RNF175Q8N4F7 328 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 SLC37A3Q8NCC5 494 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 AKAP1Q92667 903 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 FCRL1Q96LA6 429 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 MAGEB10Q96LZ2 347 aaPredicted RBP16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 HTATIP2Q9BUP3 242 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 ADGRE3Q9BY15 652 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 PPP1R3EQ9H7J1 279 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 B3GAT2Q9NPZ5 323 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 IL17CQ9P0M4 197 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 SNX11Q9Y5W9 270 aa16.9■□□□□ 0.3
CDKN1B-201ENST00000228872 C1orf226A1L170 272 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 C1SP09871 688 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 SDC2P34741 201 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 RGS1Q08116 209 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 FOXD4Q12950 439 aaPredicted RBP16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 MFSD13AQ14CX5 517 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 ANGPT1Q15389 498 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 ANKRD54Q6NXT1 300 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TEX261Q6UWH6 196 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 CERS6Q6ZMG9 384 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TMEM145Q8NBT3 493 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 PROKR2Q8NFJ6 384 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 NELL2Q99435 816 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 PPIL3Q9H2H8 161 aaKnown RBP16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 LATS2Q9NRM7 1088 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 MALT1Q9UDY8 824 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 KCNE2Q9Y6J6 123 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 U3KQ87 197 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TLR4O00206 839 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 PLOD3O60568 738 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TPPPO94811 219 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 F11P03951 625 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TACR2P21452 398 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 WEE1P30291 646 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 CYP27C1Q4G0S4 372 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 OR8H3Q8N146 312 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TTC9BQ8N6N2 239 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TMEM203Q969S6 136 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 PAWRQ96IZ0 340 aaKnown RBP16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 TCF25Q9BQ70 676 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 SOSTQ9BQB4 213 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 CORO2BQ9UQ03 480 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 PCDHGB7Q9Y5F8 929 aa16.89■□□□□ 0.29
CDKN1B-201ENST00000228872 GREB1Q4ZG55 1949 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms