RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ARFIP1P53367 373 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 SLC18A1P54219 525 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 CSTF3Q12996 717 aaKnown RBP13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 RAPSNQ13702 412 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 CPEB2Q7Z5Q1 589 aaKnown RBP13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 CLNKQ7Z7G1 428 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 GPR180Q86V85 440 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 C1orf52Q8N6N3 182 aaKnown RBP13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 METTL21AQ8WXB1 218 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 IP6K3Q96PC2 410 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 WDR77Q9BQA1 342 aaPredicted RBP13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 ARHGAP9Q9BRR9 750 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 SEMA4CQ9C0C4 833 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 ZNF160Q9HCG1 818 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 PRDM9Q9NQV7 894 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 TRAF6Q9Y4K3 522 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 CCL27Q9Y4X3 112 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 DNAJC15Q9Y5T4 150 aa13.53□□□□□ -0.24
SUPT4H1-201ENST00000225504 ARHGAP10A1A4S6 786 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 SERTM1A2A2V5 107 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 A8MUA0 341 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 H3BQF6 201 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 SEC24DO94855 1032 aaPredicted RBP13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 SERPINE1P05121 402 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 CELA2AP08217 269 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 LINC00032P0C843 101 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 HSD3B1P14060 373 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 HSD3B2P26439 372 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 PPP2R1BP30154 601 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 ID2Q02363 134 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 SFT2D3Q587I9 215 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 CCNYL2Q5T2Q4 361 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 KANK2Q63ZY3 851 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 CYP20A1Q6UW02 462 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 QSOX2Q6ZRP7 698 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 NDUFAF7Q7L592 441 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 TRIM46Q7Z4K8 759 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 NUDT13Q86X67 352 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 OR4N5Q8IXE1 308 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 CLYBLQ8N0X4 340 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 GBP7Q8N8V2 638 aaPredicted RBP13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 TMEM102Q8N9M5 508 aaPredicted RBP13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 PPP1R14CQ8TAE6 165 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 ANKRD9Q96BM1 317 aaPredicted RBP13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 IMMP1LQ96LU5 166 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 FER1L6-AS2Q96M78 137 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 ZNF700Q9H0M5 742 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 ATP13A2Q9NQ11 1180 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 PRTFDC1Q9NRG1 225 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 AHSPQ9NZD4 102 aa13.52□□□□□ -0.25
SUPT4H1-201ENST00000225504 A0A1W2PQ72 361 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 GLOD5A6NK44 160 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 PGRMC2O15173 223 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 CTNSO60931 367 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 LDB3O75112 727 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 HPP00738 406 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 ABCE1P61221 599 aaKnown RBP13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 ZNF33BQ06732 778 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 SLC13A2Q13183 592 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 SPDYAQ5MJ70 313 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 SH2D4BQ5SQS7 431 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 Q6ZSR9 355 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 ZNF595Q8IYB9 648 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 MMP21Q8N119 569 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 FDCSPQ8NFU4 85 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 OR2T11Q8NH01 316 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 SREK1Q8WXA9 508 aaKnown RBP13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 ABHD17AQ96GS6 310 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 UBL7Q96S82 380 aaPredicted RBP13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 EML4Q9HC35 981 aaKnown RBP13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 NMRK1Q9NWW6 199 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 TEX10Q9NXF1 929 aaPredicted RBP13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 NKIRAS1Q9NYS0 192 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 ADAM29Q9UKF5 820 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 ATRXP46100 2492 aa13.51□□□□□ -0.25
SUPT4H1-201ENST00000225504 DOCK10Q96BY6 2186 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 NSG1A0A0A6YYJ2 146 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 TCRBV16S1A1N1A0A5B0 115 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 CLDN4O14493 209 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 ATXN7O15265 892 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 CEACAM4O75871 244 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 PDGFAP04085 211 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 NEFHP12036 1026 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 NR1D1P20393 614 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 SERPINB5P36952 375 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 SLC1A6P48664 564 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 RRADP55042 308 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 HSD17B7P56937 341 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 OR4D2P58180 307 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 ACTN3Q08043 901 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 BST1Q10588 318 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 STX3Q13277 289 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 KCNAB2Q13303 367 aa13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 SOWAHCQ53LP3 525 aaPredicted RBP13.5□□□□□ -0.25
SUPT4H1-201ENST00000225504 GALNT16Q8N428 558 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms