RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CCSMST1Q4G0I0 132 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 SDE2Q6IQ49 451 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 USP43Q70EL4 1123 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 COMMD6Q7Z4G1 85 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 METTL4Q8N3J2 472 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 IL17RCQ8NAC3 791 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 MAPKAP1Q9BPZ7 522 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 RSPH9Q9H1X1 276 aaPredicted RBP23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 PRDM6Q9NQX0 595 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 DYRK4Q9NR20 520 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 PAIP2BQ9ULR5 123 aaKnown RBP23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 UGT2A1Q9Y4X1 527 aa23.78■■□□□ 1.4
RUNDC3A-201ENST00000225441 SH3D21A4FU49 640 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 SHISA7A6NL88 538 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 AXIN1O15169 862 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 MAN1A2O60476 641 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 NPPBP16860 134 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 CTSKP43235 329 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 CLK1P49759 484 aaKnown RBP23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 NCS1P62166 190 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 HBA1P69905 142 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 CYP2A13Q16696 494 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 AGAP7PQ5VUJ5 663 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 FAM46CQ5VWP2 391 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 FAM92BQ6ZTR7 304 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 TMPRSS11BQ86T26 416 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF605Q86T29 641 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 SLC5A8Q8N695 610 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 OR9A1PQ8NGU1 263 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 GPATCH2Q9NW75 528 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 TAS2R9Q9NYW1 312 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 AASSQ9UDR5 926 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 ICKQ9UPZ9 632 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 ANGPT4Q9Y264 503 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 C17orf113A0A1B0GUU1 675 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 AIREO43918 545 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 TGM1P22735 817 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 TBPL1P62380 186 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 ZNF385BQ569K4 471 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 GPR156Q8NFN8 814 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 KBTBD8Q8NFY9 601 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 C16orf78Q8WTQ4 265 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 FAM3CQ92520 227 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 MAL2Q969L2 176 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 LINC00615Q96LM1 132 aaPredicted RBP23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 KCNC2Q96PR1 638 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 PIP5K1AQ99755 562 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 DCSTAMPQ9H295 470 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 DSN1Q9H410 356 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 TESMINQ9Y4I5 508 aa23.77■■□□□ 1.4
RUNDC3A-201ENST00000225441 CKAP5Q14008 2032 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 KRBA1A5PL33 1030 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 KLF8O95600 359 aaPredicted RBP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 LCKP06239 509 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 ARAFP10398 606 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 GABRB1P18505 474 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 CDK6Q00534 326 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 SLBPQ14493 270 aaKnown RBP eCLIP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF648Q5T619 568 aaPredicted RBP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 NXPE4Q6UWF7 544 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 ERN2Q76MJ5 926 aaKnown RBP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 SLC46A3Q7Z3Q1 461 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 TRMT11Q7Z4G4 463 aaKnown RBP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 SYTL1Q8IYJ3 562 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 LGI4Q8N135 537 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 AMER2Q8N7J2 671 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 MCFD2Q8NI22 146 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 GGHQ92820 318 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 DTD2Q96FN9 168 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 COQ10AQ96MF6 247 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 MYOCQ99972 504 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 NXF2Q9GZY0 626 aaKnown RBP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 CCDC59Q9P031 241 aaKnown RBP23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 RAPGEFL1Q9UHV5 662 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 HCN4Q9Y3Q4 1203 aa23.76■■□□□ 1.39
RUNDC3A-201ENST00000225441 PIPSLA2A3N6 862 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 CACNB4O00305 520 aaPredicted RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 SPINT1O43278 529 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 TBX19O60806 448 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ETFAP13804 333 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ADRB3P13945 408 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 XCR1P46094 333 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 LIMS1P48059 325 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 PCBP3P57721 371 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 MRPS21P82921 87 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 SPIBQ01892 262 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 C2orf80Q0P641 193 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 STARD3Q14849 445 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 SF1Q15637 639 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 TIGD6Q17RP2 521 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ZNF404Q494X3 552 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 PLEKHG7Q6ZR37 379 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 ARMCX6Q7L4S7 300 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 MAFAQ8NHW3 353 aaPredicted RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 SLC5A11Q8WWX8 675 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 UBE2FQ969M7 185 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 HDAC8Q9BY41 377 aa23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 TRNAU1APQ9NX07 287 aaKnown RBP23.75■■□□□ 1.39
RUNDC3A-201ENST00000225441 AHSPQ9NZD4 102 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms