RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 TNFAIP8L2Q6P589 184 aaPredicted RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 HTR3DQ70Z44 454 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 ZNF740Q8NDX6 193 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 METTL2AQ96IZ6 378 aaKnown RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 CPEB1Q9BZB8 566 aaKnown RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 SCN5AQ14524 2016 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 RHCEP18577 417 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 RFX2P48378 723 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 SEC23BQ15437 767 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 ZNF517Q6ZMY9 492 aaPredicted RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 CCDC80Q76M96 950 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 MRPS31Q92665 395 aaKnown RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 NDEL1Q9GZM8 345 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 RMI1Q9H9A7 625 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 RC3H2Q9HBD1 1191 aaKnown RBP17.66■□□□□ 0.42
CACTIN-201ENST00000221899 MAPRE3Q9UPY8 281 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 V9GYH0 126 aa17.66■□□□□ 0.42
CACTIN-201ENST00000221899 A0A1W2PRU2 124 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 SMIM30A4D0T7 59 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 ZNF197O14709 1029 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 KLHL18O94889 574 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 IFNA14P01570 189 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 IL3P08700 152 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 ARAFP10398 606 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 PTPN2P17706 415 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 HMGA2P52926 109 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 PCBP3P57721 371 aaKnown RBP17.65■□□□□ 0.42
CACTIN-201ENST00000221899 RACK1P63244 317 aaKnown RBP17.65■□□□□ 0.42
CACTIN-201ENST00000221899 MRPS15P82914 257 aaKnown RBP17.65■□□□□ 0.42
CACTIN-201ENST00000221899 UAP1L1Q3KQV9 507 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 TMEM220Q6QAJ8 160 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 C2orf73Q8N5S3 287 aaPredicted RBP17.65■□□□□ 0.42
CACTIN-201ENST00000221899 SORCS1Q8WY21 1168 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 MMP28Q9H239 520 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 DMRT3Q9NQL9 472 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 A0A075B6Q4 140 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 NEDD8-MDP1E9PL57 170 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 ATG13O75143 517 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 KRT75O95678 551 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 SCG5P05408 212 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 BCHEP06276 602 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 DSTNP60981 165 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 TRIM60Q495X7 471 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 MPP7Q5T2T1 576 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 ZNF770Q6IQ21 691 aaPredicted RBP17.65■□□□□ 0.42
CACTIN-201ENST00000221899 TMPRSS11AQ6ZMR5 421 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 TMEM25Q86YD3 366 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 LAS2Q8IYD9 372 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 GPR65Q8IYL9 337 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 CPXM2Q8N436 756 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 FLCNQ8NFG4 579 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 OR2A12Q8NGT7 310 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 CHAC2Q8WUX2 184 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 CXorf40BQ96DE9 158 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 LMLNQ96KR4 655 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 SLC6A16Q9GZN6 736 aa17.65■□□□□ 0.42
CACTIN-201ENST00000221899 PIPSLA2A3N6 862 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 LEFTY2O00292 366 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 CAPN5O15484 640 aaPredicted RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 OR10H3O60404 316 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 MPZL2O60487 215 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 LEFTY1O75610 366 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 AP2A2O94973 939 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 NPPBP16860 134 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 OPRD1P41143 372 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 POLR2LP62875 67 aaKnown RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 GPR50Q13585 617 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 SPHARQ15513 63 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 ZNF79Q15937 498 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 TOR1AIP1Q5JTV8 583 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 LIPKQ5VXJ0 399 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 DEF8Q6ZN54 512 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 RBM45Q8IUH3 476 aaKnown RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 RAB8BQ92930 207 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 TMCO6Q96DC7 493 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 TMEM169Q96HH4 297 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 FOPNLQ96NB1 174 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 RSPO3Q9BXY4 272 aaPredicted RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 CXorf36Q9H7Y0 433 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 CCL26Q9Y258 94 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 SLC5A10A0PJK1 596 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 A8MVJ9 347 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 RGS13O14921 159 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 SEMA3DO95025 777 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 CTSAP10619 480 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 VIPR1P32241 457 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 DMPKQ09013 629 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 CEACAM20Q6UY09 585 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 NANOGNBQ7Z5D8 188 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 IQCF1Q8N6M8 205 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 TMEM203Q969S6 136 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 POLR2J2Q9GZM3 115 aaKnown RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 SLC25A19Q9HC21 320 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 GPBP1L1Q9HC44 474 aaPredicted RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 MIEF1Q9NQG6 463 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 LSM2Q9Y333 95 aaKnown RBP17.64■□□□□ 0.41
CACTIN-201ENST00000221899 SNX11Q9Y5W9 270 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 DOCK6Q96HP0 2047 aa17.64■□□□□ 0.41
CACTIN-201ENST00000221899 GRM6O15303 877 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms