RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 DCAF4L2Q8NA75 395 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 NT5C3BQ969T7 300 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 TXNDC15Q96J42 360 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 ZNF641Q96N77 438 aaPredicted RBP11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 C17orf62Q9BQA9 187 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 CCDC32Q9BV29 185 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 SLAMF7Q9NQ25 335 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 IMP3Q9NV31 184 aaKnown RBP11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 FAM118AQ9NWS6 357 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 RPS6KB2Q9UBS0 482 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 ACTL7AQ9Y615 435 aa11.67□□□□□ -0.54
TSPAN9-201ENST00000011898 LDB2O43679 373 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 REM1O75628 298 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 FHP07954 510 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 PRDX3P30048 256 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 MAPK9P45984 424 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ST3GAL4Q11206 333 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ELOAQ14241 798 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 FLYWCH1Q4VC44 716 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 COQ5Q5HYK3 327 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ALKAL1Q6UXT8 129 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 OR8D1Q8WZ84 308 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 RDH12Q96NR8 316 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ARNT2Q9HBZ2 717 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 PCTPQ9UKL6 214 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 USP3Q9Y6I4 520 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 TRIP12Q14669 1992 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 AP1G1O43747 822 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 CCNB2O95067 398 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 OAZ2O95190 189 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 C8AP07357 584 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 BCKDHAP12694 445 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 BMP7P18075 431 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 GPX3P22352 226 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 HSPB3Q12988 150 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 GANABQ14697 944 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 CBX2Q14781 532 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 RAB41Q5JT25 222 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 FAM205BPQ63HN1 556 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 SLC25A24Q6NUK1 477 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 TNFAIP8L2Q6P589 184 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ULK3Q6PHR2 472 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 SH2D5Q6ZV89 423 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 LINGO2Q7L985 606 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 LRRC70Q7Z2Q7 622 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 MRPL10Q7Z7H8 261 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ZFAND4Q86XD8 727 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 MARCH9Q86YJ5 346 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 CREB3L1Q96BA8 519 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 MRPL48Q96GC5 212 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ZNF471Q9BX82 626 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 CSNK1G1Q9HCP0 422 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 TTLL8A6PVC2 850 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 C1orf196B1AJZ1 125 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 APOC1P02654 83 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 CLCN4P51793 760 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 AP3S2P59780 193 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ERVPABLB-1P60509 514 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 DUOXA1Q1HG43 343 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 RFTN2Q52LD8 501 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 HES5Q5TA89 166 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 KANK2Q63ZY3 851 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 METTL2BQ6P1Q9 378 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 Q6ZVU0 165 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 FAM217AQ8IXS0 508 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 UFD1Q92890 307 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 RPL3LQ92901 407 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 METTL2AQ96IZ6 378 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ZBTB20Q9HC78 741 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 IFT46Q9NQC8 304 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 TVP23BQ9NYZ1 205 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 ACSL5Q9ULC5 683 aa11.66□□□□□ -0.54
TSPAN9-201ENST00000011898 M0QZQ0 153 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 SMAD9O15198 467 aaKnown RBP11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 SCGNO76038 276 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 PSMA6P60900 246 aaKnown RBP11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 CARD16Q5EG05 197 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 CARM1Q86X55 608 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 LGI4Q8N135 537 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 RAD51AP1Q96B01 352 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 MGLLQ99685 303 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 MYOCQ99972 504 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 TTLL2Q9BWV7 592 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 EQTNQ9NQ60 294 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 POFUT2Q9Y2G5 429 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 ABHD14A-ACY1A0A1B0GW23 586 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 A0A1W2PRB8 838 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 TPST2O60704 377 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 ATP1B2P14415 290 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 ARL4DP49703 201 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 SELENBP1Q13228 472 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 LRRC26Q2I0M4 334 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 GPRC6AQ5T6X5 926 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 SSX9Q7RTT3 188 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 STOML3Q8TAV4 291 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 ASB15Q8WXK1 588 aa11.65□□□□□ -0.54
TSPAN9-201ENST00000011898 KAT2AQ92830 837 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms