RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Arhgap1Q5FWK3 439 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Spdye4aQ5IBH6 268 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Q5SPV6 233 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Nfe2l2Q60795 597 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tssk1bQ61241 365 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Dmc1Q61880 340 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Six3Q62233 333 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ppp3r2Q63811 179 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Atg9bQ6EBV9 922 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hist2h2aa1Q6GSS7 130 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Stmnd1Q6P3A1 279 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Prr5Q812A5 387 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Il17reQ8BH06 637 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 HadhaQ8BMS1 763 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cfap20Q8BTU1 193 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Micu2Q8CD10 432 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr168Q8VF05 312 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1411Q8VFC4 323 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1353Q8VGU8 309 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Itfg2Q91WI7 443 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mrpl37Q921S7 423 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Oas1cQ924S2 362 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc6a19Q9D687 634 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cers5Q9D6K9 414 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 AplfQ9D842 499 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 P33monoxQ9DBN4 303 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 BvesQ9ES83 358 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Il17rbQ9JIP3 499 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fem1bQ9Z2G0 627 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CitP49025 2055 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tex13aA2AFS9 377 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DytnA2CI98 653 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cdc20bD3Z3I0 519 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm5799E9Q2M1 201 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ces2hF6Z9B9 558 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm16440K7N6G6 218 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gm8271L7N2E2 218 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Lsm2O35900 95 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Id1P20067 168 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Actr1aP61164 376 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tmem207P86045 143 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Grm1P97772 1199 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 CrxosQ3UL53 246 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Usp30Q3UN04 517 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp658Q5PPQ4 887 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Spcs3Q6ZWQ7 180 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1015Q7TR94 312 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Rpp38Q80UU2 280 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Bdh1Q80XN0 343 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 SprnQ8BWU1 147 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc25a42Q8R0Y8 318 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc29a4Q8R139 528 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Agr3Q8R3W7 165 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NagsQ8R4H7 527 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hip1Q8VD75 1029 aaKnown RBP9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Mrgpra4Q91WW2 313 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 3300002I08RikQ9CXH3 147 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Chaf1bQ9D0N7 572 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DtnaQ9D2N4 746 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Tsga13Q9DA17 273 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 1700016D06RikQ9DAA5 166 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Panx1Q9JIP4 426 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Nt5cQ9JM14 200 aa9.36□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 NinQ61043 2035 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Xlr5aA2BI45 236 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Clrn2B2RVW2 232 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 FanceB8JJD6 213 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r76F8VQ63 324 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Oaz2O08608 189 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Bet1O35623 118 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hyal2O35632 473 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Limk2O54785 638 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ctla2bP12400 113 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 DctP29812 517 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Adamts10P58459 1104 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Fam198bQ3UPI1 517 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 UrgcpQ5NCI0 926 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ttf1Q62187 859 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cachd1Q6PDJ1 1288 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Eid2Q6X7S9 236 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Olfr1057Q7TR75 315 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Slc30a6Q8BJM5 460 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cdkl3Q8BLF2 595 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Trmt2aQ8BNV1 574 aaKnown RBP9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ikzf5Q8BU00 419 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Acot11Q8VHQ9 594 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Gorasp2Q99JX3 451 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Msh4Q99MT2 958 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Alkbh7Q9D6Z0 221 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Hsd17b11Q9EQ06 298 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 PrelpQ9JK53 378 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Myo18aQ9JMH9 2050 aaKnown RBP9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Btnl6A2CG22 539 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Zfp963D3Z2T8 383 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Vmn1r57K7N731 310 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Cd83O88324 196 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Ptpn11P35235 597 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Kcnj9P48543 393 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 SgcgP82348 291 aa9.35□□□□□ -0.91
Hmgb1-201ENSMUST00000085546 Pyroxd2Q3U4I7 581 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms