RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 FevQ8QZW2 237 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Vsig1Q9D2J4 407 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rhox2aQ9D4Y3 191 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cd247P24161 164 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tead2P48301 445 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cmpk2Q3U5Q7 447 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm5113Q3UGK8 141 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm732Q3V0P9 516 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 HecaQ3V1N5 544 aaKnown RBP10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ddx5Q61656 614 aaKnown RBP10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ppp3r2Q63811 179 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Susd6Q8BGE4 302 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ndrg4Q8BTG7 352 aaKnown RBP10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 TympQ99N42 471 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dyrk1bQ9Z188 629 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm21149A0A0G2JFY7 255 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr396-ps1A0A0U1RNF5 211 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Speer4eK7N6S8 255 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Efna3O08545 230 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 H2-Q1O19441 368 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 FxnO35943 207 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Capns1O88456 269 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 InhaQ04997 366 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Mrgprb1Q3UG61 350 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rnf215Q5SPX3 379 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 ErfeQ6PGN1 340 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tas2r13Q7M720 305 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Glcci1Q8K3I9 537 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CipcQ8R0W1 432 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1278Q8VF39 313 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr447Q8VGP6 310 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 VitQ8VHI5 650 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ovca2Q9D7E3 225 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 5830411N06RikB3F5L4 1112 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm5415E9PXF3 478 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Slc6a2O55192 617 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 TpbpaP13438 124 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gpx5P21765 221 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rps13P62301 151 aaKnown RBP10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CrtamQ149L7 389 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ankrd42Q3V096 527 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 EgflamQ4VBE4 1017 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Trim50Q810I2 483 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Il17rdQ8JZL1 738 aa10.89□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm4775F7ANJ3 135 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ugt2a2Q6PDD0 528 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ubtd2Q6PGH0 234 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Mpp7Q8BVD5 576 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Pex5lQ8C437 567 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Phc2Q9QWH1 850 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 ChmlQ9QZD5 621 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Kcnk7Q9Z2T1 307 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Col11a2Q64739 1736 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dock8Q8C147 2100 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Malt1Q2TBA3 832 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tex10Q3URQ0 928 aaKnown RBP10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Znf516Q7TSH3 1157 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 H2-M10.2Q85ZW9 329 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rbm45Q8BHN5 476 aaKnown RBP10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Nceh1Q8BLF1 408 aaKnown RBP10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 FktnQ8R507 461 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gipc3Q8R5M0 297 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr398Q8VFY0 314 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 ItpaQ9D892 198 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rcan2Q9JHG2 197 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Znf207Q9JMD0 495 aaKnown RBP10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 ChadO55226 358 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 CyctP00015 105 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rit1P70426 219 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Adra1bP97717 514 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cdk10Q3UMM4 360 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Dcdc2Q5DU00 475 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Igfbp7Q61581 281 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cox8aQ64445 69 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Mapre3Q6PER3 281 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Coq4Q8BGB8 266 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Efemp1Q8BPB5 493 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 TrhdeQ8K093 1025 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Kcnc4Q8R1C0 628 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1387Q8VFA9 311 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Hspb11Q9D6H2 143 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ppil3Q9D6L8 161 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Rgs20Q9QZB1 239 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Scgb2b17S4R2V3 82 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Nhsl2B1AXH1 854 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Gm11397F6V5V4 377 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Vmn2r12L7N217 831 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tssk2O54863 358 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 C9P06683 548 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Pmp22P16646 161 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Hnf1bP27889 558 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Pde12Q3TIU4 608 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Cdkl4Q3TZA2 342 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tas2r117Q7M715 330 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Tas2r3Q7TQA7 316 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Olfr1418Q7TQS3 318 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Fam109aQ8BH49 266 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Mta1Q8K4B0 715 aaKnown RBP10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Slc9a8Q8R4D1 576 aa10.88□□□□□ -0.67
Topbp1-201ENSMUST00000035164 Ntng1Q8R4G0 539 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms