RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Adap2Q8R2V5 381 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Paip1Q8VE62 400 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr818Q8VG46 318 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Plpp3Q99JY8 312 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Commd4Q9CQ02 199 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ttc9bQ9D6E4 239 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Upk3bl1Q9D701 249 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 ClpxQ9JHS4 634 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Plod2Q9R0B9 737 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm5565A0A0G2JGB2 317 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Igkv10-96A0A140T8M1 115 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Dbx2F8VQH7 377 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gtpbp1O08582 668 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Csnk2a2O54833 350 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Socs5O54928 536 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Hmgn1P18608 96 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Rps3P62908 243 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tmem102Q3UPR7 509 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Snx21Q3UR97 363 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tbc1d24Q3UUG6 561 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Pnliprp1Q5BKQ4 473 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cntn4Q69Z26 1026 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zzz3Q6KAQ7 910 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ppp2r2bQ6ZWR4 443 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 SnupnQ80W37 358 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Hsfy2Q80Y37 392 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 MmaaQ8C7H1 415 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Capn8Q91VA3 703 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Dgat2Q9DCV3 388 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Trim2Q9ESN6 744 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc29a1Q9JIM1 460 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Nectin1Q9JKF6 515 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Hacl1Q9QXE0 581 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm21904A8HG57 180 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Fam46aD3Z5S8 447 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Aldh3b2E9Q3E1 479 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm21866J3QMH4 180 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Alox8O35936 677 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 P01644 108 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 P01645 108 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 P01646 108 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 P01647 108 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc6a13P31649 602 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 DbiP31786 87 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gdi1P50396 447 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Yes1Q04736 541 aaKnown RBP9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Lmf1Q3U3R4 574 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 D13Ertd608eQ3UPR8 151 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc23a3Q60850 611 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Prrt3Q6PE13 971 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc25a12Q8BH59 677 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mab21l2Q8BPP1 359 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Rgs7bpQ8BQP9 257 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Aifm2Q8BUE4 373 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ptges2Q8BWM0 384 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Lcmt2Q8BYR1 686 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 C1raQ8CG16 707 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tspan33Q8R3S2 283 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cd207Q8VBX4 331 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr599Q8VG01 315 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc35b2Q91ZN5 431 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Yipf2Q99LP8 312 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Adam18Q9R157 719 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cacna1dQ99246 2179 aa9.57□□□□□ -0.88
Ldlr-201ENSMUST00000034713 KantrA0A1W2P7I0 76 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc9a6A1L3P4 702 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Fam83cA2ARK0 776 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Gm8871F7AXK2 190 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Atp1b2P14231 290 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zfp60P16374 707 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zfp37P17141 594 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Matn1P51942 500 aaKnown RBP9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Fgfr3Q61851 801 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ift52Q62559 426 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ugt2a2Q6PDD0 528 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tas2r110Q7M712 333 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tigd3Q7TM95 470 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Wipi2Q80W47 445 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slitrk5Q810B7 957 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 SynbQ8BI41 618 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Slc41a2Q8BYR8 573 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cpne1Q8C166 536 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Dpep2Q8C255 478 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mfsd6Q8CBH5 775 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Trmt6Q8CE96 497 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Zmiz2Q8CIE2 920 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Actr6Q9D864 396 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Xpr1Q9Z0U0 695 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Rhox2dW4VSN9 191 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Xlr4aA2BI40 215 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Mgl2A9XX86 381 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cyp2j8G3UZ38 503 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Olfr519K7N645 319 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Psmd4O35226 376 aaKnown RBP9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Cfl1P18760 166 aaKnown RBP9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Dcst1Q059Y8 732 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 UbqlnlQ14DL0 610 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Xlr4cQ3TKR2 215 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Tlx2Q61663 284 aa9.56□□□□□ -0.88
Ldlr-201ENSMUST00000034713 Ifngr2Q63953 332 aa9.56□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms