RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-223ENST00000640001 C19orf43Q9BQ61 176 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 FUNDC2Q9BWH2 189 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 DNAAF2Q9NVR5 837 aaKnown RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 SPATA6Q9NWH7 488 aaPredicted RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 NDRG2Q9UN36 371 aaKnown RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 GPR34Q9UPC5 381 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 THSD7BQ9C0I4 1608 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 PATJQ8NI35 1801 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 AGAP14A8MT82 685 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 CHRM5P08912 532 aaPredicted RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 CCNYL3P0C7X3 344 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 ACPPP15309 386 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 PCGF2P35227 344 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 SOX6P35712 828 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 VBP1P61758 197 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 RBBP4Q09028 425 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 MESP2Q0VG99 397 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 IRF4Q15306 451 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 BORAQ6PGQ7 559 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 TMEM179BQ7Z7N9 219 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 CLIP4Q8N3C7 705 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 WDR20Q8TBZ3 569 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 DOK4Q8TEW6 326 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 CHTF18Q8WVB6 975 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 HMGB4Q8WW32 186 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 SGCDQ92629 289 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 EZH1Q92800 747 aaPredicted RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 RERGQ96A58 199 aaPredicted RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 COQ10AQ96MF6 247 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 LRRC3BQ96PB8 259 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 RAB11FIP5Q9BXF6 653 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 SLC17A9Q9BYT1 436 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 AMBRA1Q9C0C7 1298 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 POLR2J3Q9H1A7 115 aaKnown RBP7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 KCNK12Q9HB15 430 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 SERHLQ9NQF3 203 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 ABCB10Q9NRK6 738 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 GDE1Q9NZC3 331 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 TMEM9Q9P0T7 183 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 P2RX2Q9UBL9 471 aa7.4□□□□□ -1.22
HNRNPU-223ENST00000640001 SCN5AQ14524 2016 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 KCNE1BA0A087WTH5 132 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 SLC35G6P0C7Q6 338 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 CSNK2A2P19784 350 aaPredicted RBP7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 PTNP21246 168 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 C5AR1P21730 350 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 PIK3CBP42338 1070 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 ZFP36L2P47974 494 aaKnown RBP7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 STXBP1P61764 594 aaKnown RBP7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 RPS7P62081 194 aaKnown RBP7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 GNA13Q14344 377 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 DEPDC1Q5TB30 811 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 ARMC5Q96C12 935 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 TMEM19Q96HH6 336 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 RIPOR3Q96MK2 946 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 SLC6A17Q9H1V8 727 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 PREBQ9HCU5 417 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 SLC52A3Q9NQ40 469 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 PRDM8Q9NQV8 689 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 DZANK1Q9NVP4 752 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 TVP23BQ9NYZ1 205 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 SH2B3Q9UQQ2 575 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 ERGIC3Q9Y282 383 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 LYVE1Q9Y5Y7 322 aa7.4□□□□□ -1.23
HNRNPU-223ENST00000640001 AGRPO00253 132 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 AP3D1O14617 1153 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 H1F0P07305 194 aaKnown RBP7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 CDK4P11802 303 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 ALOX12P18054 663 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 GPX2P18283 190 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 MYL12AP19105 171 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 MAGP20916 626 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 ZNF10P21506 573 aaPredicted RBP7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 CPN2P22792 545 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 GSTM2P28161 218 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 SERPINB1P30740 379 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 MRPL19P49406 292 aaKnown RBP7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 KHKP50053 298 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 RAB28P51157 221 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 DAPP51397 102 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 CRISP3P54108 245 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 EPHA5P54756 1037 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 CLDN2P57739 230 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 RGS8P57771 180 aaPredicted RBP7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 SELENOWP63302 87 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 PRR5P85299 388 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 FCHO2Q0JRZ9 810 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 ILF3Q12906 894 aaKnown RBP eCLIP7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 NFATC3Q12968 1075 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 RPA4Q13156 261 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 SLAMF1Q13291 335 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 TIGD6Q17RP2 521 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 ZNF385BQ569K4 471 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 MFSD4BQ5TF39 518 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 LCTLQ6UWM7 567 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 ZNF765Q7L2R6 523 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 SLC9B2Q86UD5 537 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 AMER2Q8N7J2 671 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 TTLQ8NG68 377 aa7.39□□□□□ -1.23
HNRNPU-223ENST00000640001 ZFP90Q8TF47 636 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms