RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 FTLP02792 175 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 C8orf89P0DMQ9 161 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 GAAP10253 952 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 KRT15P19012 456 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 APEX1P27695 318 aaKnown RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CCKARP32238 428 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 MC4RP32245 332 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 PAPOLAP51003 745 aaKnown RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 MAP2K6P52564 334 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CDK17Q00537 523 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 FMO1Q01740 532 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CHRNB3Q05901 458 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 NSUN2Q08J23 767 aaKnown RBP eCLIP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 BAMBIQ13145 260 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 RCAN2Q14206 197 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 TSC22D1Q15714 1073 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CNGA2Q16280 664 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 IQCCQ4KMZ1 466 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 TMEM119Q4V9L6 283 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 TAF3Q5VWG9 929 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 OR2A2Q6IF42 318 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 SLC30A6Q6NXT4 461 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 PLBD1Q6P4A8 553 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 C16orf87Q6PH81 154 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 MARK2Q7KZI7 788 aaKnown RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CPOQ8IVL8 374 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 TXLNBQ8N3L3 684 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 TMEM251Q8N6I4 163 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 IPCEF1Q8WWN9 437 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 RGMAQ96B86 450 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 FANCD2OSQ96PS1 177 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CSPG4P5Q96PW8 444 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 TACO1Q9BSH4 297 aaKnown RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 SSBP4Q9BWG4 385 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 ZYG11BQ9C0D3 744 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 GHITMQ9H3K2 345 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 MYO1AQ9UBC5 1043 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 SPRR3Q9UBC9 169 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 LHX3Q9UBR4 397 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 MOKQ9UQ07 419 aa3.13□□□□□ -1.91
CCDC7-213ENST00000639290 CFAP20Q9Y6A4 193 aaKnown RBP3.13□□□□□ -1.91
CCDC7-213ENST00000639290 A0A0U1RQJ8 604 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CLGNO14967 610 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 SLC27A2O14975 620 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 DOK2O60496 412 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 URI1O94763 535 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-213ENST00000639290 TJP3O95049 919 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 PRSS23O95084 383 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 IFNW1P05000 195 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CLEC2LP0C7M8 214 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CNR1P21554 472 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 FBLP22087 321 aaKnown RBP3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CHATP28329 748 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 LMAN1P49257 510 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 PROK1P58294 105 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 GALNT2Q10471 571 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CUL4AQ13619 759 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 DPYSQ14117 519 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 KIR2DS3Q14952 304 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 INSCQ1MX18 579 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 KLHDC7AQ5VTJ3 777 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ZNF449Q6P9G9 518 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 C11orf88Q6PI97 169 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ESPNLQ6ZVH7 1005 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 TTLL10Q6ZVT0 673 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CNTN4Q8IWV2 1026 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 C12orf56Q8IXR9 622 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 TEX9Q8N6V9 391 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ACVR1CQ8NER5 493 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 MCOLN3Q8TDD5 553 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ELP5Q8TE02 316 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 FNIP1Q8TF40 1166 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 TMEM174Q8WUU8 243 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CACNG6Q9BXT2 260 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 TXLNGYQ9BZA5 131 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 OSGEPL1Q9H4B0 414 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 MRPL44Q9H9J2 332 aaKnown RBP3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ABCF3Q9NUQ8 709 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 EURLQ9NYK6 297 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 KCNG2Q9UJ96 466 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CRLS1Q9UJA2 301 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 MID2Q9UJV3 735 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ZNF711Q9Y462 761 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 MED12Q93074 2177 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 A0A0J9YY10 115 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 A0A1W2PPL8 197 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 F8W8V4 182 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 MYO1FO00160 1098 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 SEC14L2O76054 403 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 AMY2AP04746 511 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ATP6V1B1P15313 513 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 AMY2BP19961 511 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 VEGFCP49767 419 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 CLCN2P51788 898 aa3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ARF3P61204 181 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-213ENST00000639290 ARF1P84077 181 aaKnown RBP3.12□□□□□ -1.91
CCDC7-213ENST00000639290 BCL2L1Q07817 233 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms