RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CDYL2Q8N8U2 506 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 CCDC63Q8NA47 563 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 SRFBP1Q8NEF9 429 aaKnown RBP20.45■□□□□ 0.87
SCN1B-206ENST00000638536 RGMAQ96B86 450 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 KCNA7Q96RP8 456 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 ZNF382Q96SR6 550 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 OXSMQ9NWU1 459 aa20.45■□□□□ 0.87
SCN1B-206ENST00000638536 A0A088AWK7 358 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 MYOCOSA0A1B0GUC4 107 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 CYC1P08574 325 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 PRR35P0CG20 571 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 ZNF10P21506 573 aaPredicted RBP20.45■□□□□ 0.86
SCN1B-206ENST00000638536 TGM3Q08188 693 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 FAM111AQ96PZ2 611 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 LHPPQ9H008 270 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 TNFRSF12AQ9NP84 129 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 TRPS1Q9UHF7 1281 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 FBXW2Q9UKT8 454 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 CPAMD8Q8IZJ3 1885 aa20.45■□□□□ 0.86
SCN1B-206ENST00000638536 GCN1Q92616 2671 aaKnown RBP20.44■□□□□ 0.86
SCN1B-206ENST00000638536 PCDH17O14917 1159 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 GBAP04062 536 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 ITGAMP11215 1152 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 PPP2R1BP30154 601 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 RAP1GDS1P52306 607 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 FOXA1P55317 472 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 CUL3Q13618 768 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 NADK2Q4G0N4 442 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 GPRIN3Q6ZVF9 776 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 SCUBE1Q8IWY4 988 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 RBMXL3Q8N7X1 1067 aaKnown RBP20.44■□□□□ 0.86
SCN1B-206ENST00000638536 TCP10LQ8TDR4 215 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 VPS50Q96JG6 964 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 PRDM9Q9NQV7 894 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 RIC8BQ9NVN3 520 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 PSD3Q9NYI0 1048 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 TIMM22Q9Y584 194 aa20.44■□□□□ 0.86
SCN1B-206ENST00000638536 RP1L1Q8IWN7 2480 aaPredicted RBP20.43■□□□□ 0.86
SCN1B-206ENST00000638536 TCRBV16S1A1N1A0A5B0 115 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 A8MUA0 341 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 TMPRSS11DO60235 418 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 HTR6P50406 440 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 DNAJB13P59910 316 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 LCP2Q13094 533 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 IFT88Q13099 833 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 SLAMF1Q13291 335 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 BEND6Q5SZJ8 279 aaPredicted RBP20.43■□□□□ 0.86
SCN1B-206ENST00000638536 CEP85LQ5SZL2 805 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 VWA5B1Q5TIE3 1220 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 PAPD4Q6PIY7 484 aaKnown RBP20.43■□□□□ 0.86
SCN1B-206ENST00000638536 CLNKQ7Z7G1 428 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 KBTBD2Q8IY47 623 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 SIRT6Q8N6T7 355 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 RDH11Q8TC12 318 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 BRIX1Q8TDN6 353 aaKnown RBP20.43■□□□□ 0.86
SCN1B-206ENST00000638536 AGAP11Q8TF27 550 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 SELENOMQ8WWX9 145 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 UCN3Q969E3 161 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 CCDC126Q96EE4 140 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 TUBB6Q9BUF5 446 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 MECRQ9BV79 373 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 MFRPQ9BY79 579 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 MRPL1Q9BYD6 325 aaKnown RBP20.43■□□□□ 0.86
SCN1B-206ENST00000638536 ELOVL6Q9H5J4 265 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 LYRM4Q9HD34 91 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 PRTFDC1Q9NRG1 225 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 C19orf25Q9UFG5 118 aaPredicted RBP20.43■□□□□ 0.86
SCN1B-206ENST00000638536 PPT2Q9UMR5 302 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 CSAG2Q9Y5P2 127 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 CROCCQ5TZA2 2017 aa20.43■□□□□ 0.86
SCN1B-206ENST00000638536 WASHC1A8K0Z3 465 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 SUV39H1O43463 412 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 TYROBPO43914 113 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 PRKRAO75569 313 aaKnown RBP20.42■□□□□ 0.86
SCN1B-206ENST00000638536 SERPINA7P05543 415 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 CHN1P15882 459 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 HNRNPH2P55795 449 aaKnown RBP20.42■□□□□ 0.86
SCN1B-206ENST00000638536 OR4D2P58180 307 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 PHEXP78562 749 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 B3GNTL1Q67FW5 361 aaPredicted RBP20.42■□□□□ 0.86
SCN1B-206ENST00000638536 C18orf63Q68DL7 685 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 SHCBP1LQ9BZQ2 653 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 ROGDIQ9GZN7 287 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 ZNF451Q9Y4E5 1061 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 ATG4BQ9Y4P1 393 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 A0A0A6YYD5 115 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 MANBAO00462 879 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 LDB3O75112 727 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 MLYCDO95822 493 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 SLC13A2Q13183 592 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 BTBD16Q32M84 506 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 TNFAIP8L3Q5GJ75 292 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 FRMD7Q6ZUT3 714 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 EXOC3L1Q86VI1 746 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 MYRIPQ8NFW9 859 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 METTL6Q8TCB7 284 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 SMC6Q96SB8 1091 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 DDX31Q9H8H2 851 aaKnown RBP20.42■□□□□ 0.86
SCN1B-206ENST00000638536 MID1IP1Q9NPA3 183 aa20.42■□□□□ 0.86
SCN1B-206ENST00000638536 PTGFRNQ9P2B2 879 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms