RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MYLK4Q86YV6 388 aaPredicted RBP17.72■□□□□ 0.43
CLN6-221ENST00000637494 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 NFAM1Q8NET5 270 aaPredicted RBP17.72■□□□□ 0.43
CLN6-221ENST00000637494 RELTQ969Z4 430 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 CMTM7Q96FZ5 175 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 LYRM4Q9HD34 91 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 CLCA3PQ9Y6N3 262 aa17.72■□□□□ 0.43
CLN6-221ENST00000637494 A0A096LPK6 155 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 PRAMEF4O60810 478 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 CLDN1O95832 211 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 INHBAP08476 426 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 CD22P20273 847 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 GMPRP36959 345 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 SSR2P43308 183 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 PIK3CGP48736 1102 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 ST13P50502 369 aaKnown RBP17.71■□□□□ 0.43
CLN6-221ENST00000637494 HLCSP50747 726 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 RAP1GDS1P52306 607 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 ZRSR2Q15696 482 aaKnown RBP17.71■□□□□ 0.43
CLN6-221ENST00000637494 PRAMEF9Q5VWM5 478 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 CLNKQ7Z7G1 428 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 LAS2Q8IYD9 372 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 MMGT1Q8N4V1 131 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 TMEM156Q8N614 296 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 ZNF473Q8WTR7 871 aaKnown RBP17.71■□□□□ 0.43
CLN6-221ENST00000637494 DAZLQ92904 295 aaKnown RBP17.71■□□□□ 0.43
CLN6-221ENST00000637494 REPS1Q96D71 796 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 MAGED4Q96JG8 741 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 MS4A8Q9BY19 250 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 HES7Q9BYE0 225 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 VPS11Q9H270 941 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 ACSS3Q9H6R3 686 aa17.71■□□□□ 0.43
CLN6-221ENST00000637494 TNPO3Q9Y5L0 923 aaKnown RBP17.71■□□□□ 0.43
CLN6-221ENST00000637494 CTNSO60931 367 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 NEURL1O76050 574 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 ZFAND5O76080 213 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 KLHL2O95198 593 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 TGFB1P01137 390 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 TUBB4AP04350 444 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 CTAGE8P0CG41 777 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 EPORP19235 508 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 TNNI3P19429 210 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 TRHRP34981 398 aaPredicted RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 ALDH18A1P54886 795 aaKnown RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 IRF9Q00978 393 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 PCDH1Q08174 1060 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 SERTAD2Q14140 314 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 E2F2Q14209 437 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 SETDB1Q15047 1291 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 ELAVL1Q15717 326 aaKnown RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 PFKFB4Q16877 469 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 LIPJQ5W064 366 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 ADNP2Q6IQ32 1131 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 GRHL2Q6ISB3 625 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 CTAGE4Q8IX94 777 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 CENPLQ8N0S6 344 aaPredicted RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 APCDD1LQ8NCL9 501 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 OR7G3Q8NG95 312 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 THAP3Q8WTV1 239 aaPredicted RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 IFT81Q8WYA0 676 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 NCLNQ969V3 563 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 ACTR8Q9H981 624 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 PRDM7Q9NQW5 492 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 NINJ2Q9NZG7 142 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 KLF13Q9Y2Y9 288 aaPredicted RBP17.7■□□□□ 0.42
CLN6-221ENST00000637494 ASB1Q9Y576 335 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 PCDHGA11Q9Y5H2 935 aa17.7■□□□□ 0.42
CLN6-221ENST00000637494 ASPDHA6ND91 283 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 KLRC4-KLRK1H3BQV0 150 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 CCL21O00585 134 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 CYR61O00622 381 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 NME2P1O60361 137 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 ZG16O60844 167 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 TBX6O95947 436 aaPredicted RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 NME2P22392 152 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 CPN2P22792 545 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 ATP5A1P25705 553 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 SERPINB9P50453 376 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 SSR4P51571 173 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 SRSF11Q05519 484 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 DDX39BQ13838 428 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 NAA30Q147X3 362 aaPredicted RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 GLE1Q53GS7 698 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 KHDRBS2Q5VWX1 349 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 RELL1Q8IUW5 271 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 ACOT4Q8N9L9 421 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 TMEM52Q8NDY8 209 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 OR14A16Q8NHC5 309 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 RGMAQ96B86 450 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 GPR137Q96N19 417 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 FMO2Q99518 471 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 ALOXE3Q9BYJ1 711 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 TRIM45Q9H8W5 580 aaPredicted RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 MS4A12Q9NXJ0 267 aa17.69■□□□□ 0.42
CLN6-221ENST00000637494 CPSF2Q9P2I0 782 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 PPIEQ9UNP9 301 aaKnown RBP17.69■□□□□ 0.42
CLN6-221ENST00000637494 HIVEP3Q5T1R4 2406 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 NPIPA5E9PKD4 350 aa17.68■□□□□ 0.42
CLN6-221ENST00000637494 KIF2AO00139 706 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms