RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SLC44A2Q8IWA5 706 aaPredicted RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 ADGRG5Q8IZF4 528 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 OR10A6Q8NH74 314 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 C12orf66Q96MD2 445 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 NECTIN4Q96NY8 510 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 MUS81Q96NY9 551 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 SGPP1Q9BX95 441 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 OR51B5Q9H339 312 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 TRIT1Q9H3H1 467 aaKnown RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 SP140LQ9H930 580 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 SPATA6Q9NWH7 488 aaPredicted RBP11.02□□□□□ -0.65
CLN6-217ENST00000636964 ASIC5Q9NY37 505 aa11.02□□□□□ -0.65
CLN6-217ENST00000636964 CEACAM5P06731 702 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 SLC35G4P0C7Q5 338 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 C1GALT1C1LP0DN25 315 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 CDKN2CP42773 168 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 RD3Q7Z3Z2 195 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 SLC22A16Q86VW1 577 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 HORMAD1Q86X24 394 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 MSRB3Q8IXL7 192 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 ELMOD2Q8IZ81 293 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 GLB1L3Q8NCI6 653 aaPredicted RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 RAB2BQ8WUD1 216 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 MRGPRX1Q96LB2 322 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 XKR8Q9H6D3 395 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 ITM2CQ9NQX7 267 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 IMP3Q9NV31 184 aaKnown RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 TAC3Q9UHF0 121 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 PCDHB14Q9Y5E9 798 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 RNF103-CHMP3A0A140T963 221 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 OR52A4PA6NMU1 304 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 RGS13O14921 159 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 NPPAP01160 153 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 ACADMP11310 421 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 KELP23276 732 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 LRRC74AQ0VAA2 488 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 CYP51A1Q16850 503 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 TTLQ8NG68 377 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 SLC5A11Q8WWX8 675 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 RBM18Q96H35 190 aaKnown RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 INSM2Q96T92 566 aaPredicted RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 PIP5K1AQ99755 562 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 GHITMQ9H3K2 345 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 TMEM45AQ9NWC5 275 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 ACTR3BQ9P1U1 418 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 KCNN3Q9UGI6 736 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 NDRG2Q9UN36 371 aaKnown RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 PIPSLA2A3N6 862 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 RTCAO00442 366 aaKnown RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 KCNK2O95069 426 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 SPNP16150 400 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 BMP8BP34820 402 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 BNIP2Q12982 314 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 SLC13A2Q13183 592 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 MAPK11Q15759 364 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 PRAMEF14Q5SWL7 426 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 PRAMEF13Q5VWM6 474 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 FAM180BQ6P0A1 224 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 GCNT7Q6ZNI0 430 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 DCUN1D3Q8IWE4 304 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 OR5K2Q8NHB8 316 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 ZNF486Q96H40 463 aaPredicted RBP11.01□□□□□ -0.65
CLN6-217ENST00000636964 SEPHS2Q99611 448 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 APOOQ9BUR5 198 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 IFT22Q9H7X7 185 aa11.01□□□□□ -0.65
CLN6-217ENST00000636964 GNG14A0A1W2PPG7 69 aa11□□□□□ -0.65
CLN6-217ENST00000636964 DHRS12A0PJE2 317 aa11□□□□□ -0.65
CLN6-217ENST00000636964 ANXA4P09525 319 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 NDUFV2P19404 249 aa11□□□□□ -0.65
CLN6-217ENST00000636964 PRPH2P23942 346 aa11□□□□□ -0.65
CLN6-217ENST00000636964 HRH2P25021 359 aa11□□□□□ -0.65
CLN6-217ENST00000636964 MAPK1P28482 360 aa11□□□□□ -0.65
CLN6-217ENST00000636964 EEFSECP57772 596 aaKnown RBP11□□□□□ -0.65
CLN6-217ENST00000636964 GPR85P60893 370 aa11□□□□□ -0.65
CLN6-217ENST00000636964 RAE1P78406 368 aaKnown RBP11□□□□□ -0.65
CLN6-217ENST00000636964 RPA4Q13156 261 aa11□□□□□ -0.65
CLN6-217ENST00000636964 AGERQ15109 404 aa11□□□□□ -0.65
CLN6-217ENST00000636964 HKDC1Q2TB90 917 aa11□□□□□ -0.65
CLN6-217ENST00000636964 CCNYL2Q5T2Q4 361 aa11□□□□□ -0.65
CLN6-217ENST00000636964 GLYATQ6IB77 296 aa11□□□□□ -0.65
CLN6-217ENST00000636964 KIAA1161Q6NSJ0 714 aa11□□□□□ -0.65
CLN6-217ENST00000636964 NXPE4Q6UWF7 544 aa11□□□□□ -0.65
CLN6-217ENST00000636964 KLHDC8AQ8IYD2 350 aa11□□□□□ -0.65
CLN6-217ENST00000636964 C10orf111Q8N326 155 aa11□□□□□ -0.65
CLN6-217ENST00000636964 MAGEE2Q8TD90 523 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 SGK3Q96BR1 496 aa11□□□□□ -0.65
CLN6-217ENST00000636964 MAGEB10Q96LZ2 347 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 EPS8L2Q9H6S3 715 aa11□□□□□ -0.65
CLN6-217ENST00000636964 RUBCNLQ9H714 662 aa11□□□□□ -0.65
CLN6-217ENST00000636964 CD320Q9NPF0 282 aa11□□□□□ -0.65
CLN6-217ENST00000636964 CUEDC1Q9NWM3 386 aaPredicted RBP11□□□□□ -0.65
CLN6-217ENST00000636964 BTBD3Q9Y2F9 522 aa11□□□□□ -0.65
CLN6-217ENST00000636964 PDZK1P1A8MUH7 402 aa11□□□□□ -0.65
CLN6-217ENST00000636964 SULT1B1O43704 296 aa11□□□□□ -0.65
CLN6-217ENST00000636964 ALOX5P09917 674 aa11□□□□□ -0.65
CLN6-217ENST00000636964 COX7A2P14406 83 aa11□□□□□ -0.65
CLN6-217ENST00000636964 IL7RP16871 459 aa11□□□□□ -0.65
CLN6-217ENST00000636964 CYP4F2P78329 520 aa11□□□□□ -0.65
CLN6-217ENST00000636964 MLLT1Q03111 559 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms