RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 PAQR3Q6TCH7 311 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 RTL4Q6ZR62 310 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 FAM47EQ6ZV65 393 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 FAM222BQ8WU58 562 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 TSNARE1Q96NA8 513 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 NDNQ99608 321 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 BAG1Q99933 345 aaPredicted RBP18.65■□□□□ 0.58
TARDBP-228ENST00000629725 EXO5Q9H790 373 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 ADAP2Q9NPF8 381 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 PRTFDC1Q9NRG1 225 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 TAS2R13Q9NYV9 303 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 CBLCQ9ULV8 474 aa18.65■□□□□ 0.58
TARDBP-228ENST00000629725 TGFBR3LH3BV60 316 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 CLDN4O14493 209 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 SERPINA6P08185 405 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 CELA3AP09093 270 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 AP1S2P56377 157 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 BTN3A2P78410 334 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 REEP5Q00765 189 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 BMPR2Q13873 1038 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 RBBP5Q15291 538 aaKnown RBP18.64■□□□□ 0.57
TARDBP-228ENST00000629725 HYAL4Q2M3T9 481 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 BBS9Q3SYG4 887 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 TOR1AIP1Q5JTV8 583 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 FBXW10Q5XX13 1052 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 HSDL2Q6YN16 418 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 GOLM1Q8NBJ4 401 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 LINGO1Q96FE5 620 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 LRRC46Q96FV0 321 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 SCYL1Q96KG9 808 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 SACM1LQ9NTJ5 587 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 CLDN16Q9Y5I7 305 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 MAD1L1Q9Y6D9 718 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 CLCA3PQ9Y6N3 262 aa18.64■□□□□ 0.57
TARDBP-228ENST00000629725 HSPB2A8KAH6 182 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 ATE1O95260 518 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 INHBBP09529 407 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 MLNP12872 115 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 MAGEA6P43360 314 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 DNASE1L1P49184 302 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 VPS41P49754 854 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 HK2P52789 917 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 FOXO1Q12778 655 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 GPS1Q13098 491 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 HSPB2Q16082 182 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 HSP90AA5PQ58FG0 334 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 ANKRD22Q5VYY1 191 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 TMEM132CQ8N3T6 1108 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 SREK1Q8WXA9 508 aaKnown RBP18.63■□□□□ 0.57
TARDBP-228ENST00000629725 ATL1Q8WXF7 558 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 FAR2Q96K12 515 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 SGCZQ96LD1 299 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 AIF1LQ9BQI0 150 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 TRIM54Q9BYV2 358 aa18.63■□□□□ 0.57
TARDBP-228ENST00000629725 JMJD1CQ15652 2540 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 TRGV5A0A0B4J1U4 118 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 HCN1O60741 890 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 GUCA1CO95843 209 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 P04436 131 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 SAT1P21673 171 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 BMP5P22003 454 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 HOXC12P31275 282 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 HNRNPFP52597 415 aaKnown RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 STXBP1P61764 594 aaKnown RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 RUNX2Q13950 521 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 DAZAP2Q15038 168 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 ELAVL1Q15717 326 aaKnown RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 CLEC9AQ6UXN8 241 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 TMPRSS11BQ86T26 416 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 TMEM52Q8NDY8 209 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 MAIP1Q8WWC4 291 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 FBXL8Q96CD0 374 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 SH3GL2Q99962 352 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 FAM167BQ9BTA0 163 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 NPLQ9BXD5 320 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 AICDAQ9GZX7 198 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 PELI2Q9HAT8 420 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 IARS2Q9NSE4 1012 aaKnown RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 TUBA8Q9NY65 449 aaPredicted RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 MRPS33Q9Y291 106 aaKnown RBP18.62■□□□□ 0.57
TARDBP-228ENST00000629725 DYRK1BQ9Y463 629 aa18.62■□□□□ 0.57
TARDBP-228ENST00000629725 NCKAP5O14513 1909 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.61■□□□□ 0.57
TARDBP-228ENST00000629725 SYNDIG1LA6NDD5 238 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 DVL2O14641 736 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 FGGP02679 453 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 IFNA16P05015 189 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 ENDOUP21128 410 aaKnown RBP18.61■□□□□ 0.57
TARDBP-228ENST00000629725 ASCL1P50553 236 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 CDKN2DP55273 166 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 RAB38P57729 211 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 CCZ1BP86790 482 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 CCZ1P86791 482 aaPredicted RBP18.61■□□□□ 0.57
TARDBP-228ENST00000629725 TMEM198Q66K66 360 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 CLNKQ7Z7G1 428 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 TMEM139Q8IV31 216 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 ZNF595Q8IYB9 648 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 GPATCH11Q8N954 259 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 FAM47BQ8NA70 645 aa18.61■□□□□ 0.57
TARDBP-228ENST00000629725 RELL2Q8NC24 303 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms