RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 ENPP3O14638 875 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 DCUN1D3Q8IWE4 304 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 DCBLD1Q8N8Z6 715 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 NANOS1Q8WY41 292 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 ARGFXA6NJG6 315 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 TAL1P17542 331 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 KCNC4Q03721 635 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 LASP1Q14847 261 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 NKAPLQ5M9Q1 402 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 HAS1Q92839 578 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 GCDHQ92947 438 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 MROQ9BYG7 248 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMEM185BQ9H7F4 350 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMEM165Q9HC07 324 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 SDHAF2Q9NX18 166 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 LILRB5O75023 590 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 IMPDH1P20839 514 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 ITPRIPL2Q3MIP1 535 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 RCBTB1Q8NDN9 531 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM110BQ8TC76 370 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 COQ10BQ9H8M1 238 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 OXSMQ9NWU1 459 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 TAS2R8Q9NYW2 309 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 POU2F3Q9UKI9 436 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 TIAM2Q8IVF5 1701 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 ACTL6BO94805 426 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 HEXBP07686 556 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 RORAP35398 523 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 RFWD3Q6PCD5 774 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 BANPQ8N9N5 519 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 CCDC71LQ8N9Z2 235 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FUCA2Q9BTY2 467 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 INTS1Q8N201 2190 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 A8MUI8 341 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 HRH2P25021 359 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FLYWCH1Q4VC44 716 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC22A10Q63ZE4 541 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR8S1Q8NH09 359 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 NSMAFQ92636 917 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FKBP10Q96AY3 582 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC32A1Q9H598 525 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 POLR2AP24928 1970 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 EI24O14681 340 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 BCHEP06276 602 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FXYD6P3P58550 94 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 EOGTQ5NDL2 527 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 MTFR2Q6P444 385 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 EPHA6Q9UF33 1036 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 RNF215Q9Y6U7 377 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM237AA0A1B0GTK4 181 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 KCNC1P48547 511 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 UBXN2BQ14CS0 331 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR52B2Q96RD2 323 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 FBXW11Q9UKB1 542 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 DNAJB5O75953 348 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 DLDP09622 509 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 RAB11BQ15907 218 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF404Q494X3 552 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 CYBRD1Q53TN4 286 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 IGSF9Q9P2J2 1179 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 HSPB11Q9Y547 144 aa12.73□□□□□ -0.37
SYNGAP1-208ENST00000629380 PLGLAQ15195 96 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SF3B4Q15427 424 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■■■■□ 20.9
SYNGAP1-208ENST00000629380 CDNFQ49AH0 187 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 C6orf120Q7Z4R8 191 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 GNG13Q9P2W3 67 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ACSL5Q9ULC5 683 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZFR2Q9UPR6 939 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 NAALAD2Q9Y3Q0 740 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CACNA1DQ01668 2161 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 KCNC3Q14003 757 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 MLIPQ5VWP3 458 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR2T33Q8NG76 320 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 GLYATL1Q969I3 302 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 MAELQ96JY0 434 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 FKBPLQ9UIM3 349 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 POMPQ9Y244 141 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 AP1M2Q9Y6Q5 423 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 UNC119BA6NIH7 251 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ECI2O75521 394 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF8P17098 575 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ERVK-16P61578 105 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ZNF616Q08AN1 781 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 SLC5A11Q8WWX8 675 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 TMEM203Q969S6 136 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 TDRD15B5MCY1 1934 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 TRAV6A0A075B6T7 132 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 FAM155BO75949 473 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 IFNA17P01571 189 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 ALPIP09923 528 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CCNOP22674 350 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 CLCNKBP51801 687 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 UBQLNLQ8IYU4 475 aa12.72□□□□□ -0.37
SYNGAP1-208ENST00000629380 OR5M3Q8NGP4 307 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms