RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 SCN2BO60939 215 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ENTPD5O75356 428 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CPSF4O95639 269 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ATP6V1G2O95670 118 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 EIF2S1P05198 315 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ZNF888P0CJ79 500 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 TCN1P20061 433 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 EFNA1P20827 205 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 MSX2P35548 267 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 RPL3P39023 403 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CDKN2CP42773 168 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 GSTM5P46439 218 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CCT8P50990 548 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ARFIP1P53367 373 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 TRA2BP62995 288 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 KLC1Q07866 573 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 TGM3Q08188 693 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 RIPK1Q13546 671 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 PDE7AQ13946 482 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 SELPLGQ14242 412 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 PRSS53Q2L4Q9 553 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 DEFB110Q30KQ9 67 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 GTDC1Q4AE62 458 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 RABL3Q5HYI8 236 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ZCCHC8Q6NZY4 707 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC23A3Q6PIS1 610 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 DGLUCYQ7Z3D6 616 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 R3HCC1LQ7Z5L2 792 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 KIAA2013Q8IYS2 634 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CLECL1Q8IZS7 167 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 MMP21Q8N119 569 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 Q8N9G6 341 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ACOT4Q8N9L9 421 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 FAM156AQ8NDB6 213 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR2I1PQ8NGU4 316 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR8K5Q8NH50 307 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 OR4C6Q8NH72 309 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 DNAJB8Q8NHS0 232 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ZCCHC10Q8TBK6 192 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 UTP15Q8TED0 518 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 GAL3ST3Q96A11 431 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 RERGQ96A58 199 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 MIEF2Q96C03 454 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 PPCDCQ96CD2 204 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 COQ8BQ96D53 544 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 TGM7Q96PF1 710 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 KCNC2Q96PR1 638 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CITED4Q96RK1 184 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 BHLHE41Q9C0J9 482 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 PAIP1Q9H074 479 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 RAB33BQ9H082 229 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 FAM60AQ9NP50 221 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 BRD7Q9NPI1 651 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 C1GALT1Q9NS00 363 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 VAPAQ9P0L0 249 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 CD300AQ9UGN4 299 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 GMEB2Q9UKD1 530 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 PADI4Q9UM07 663 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 WBP11Q9Y2W2 641 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 L3MBTL1Q9Y468 752 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 NEUROG3Q9Y4Z2 214 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 ADAMTS9Q9P2N4 1935 aa9.43□□□□□ -0.9
SOX2-OT-244ENST00000627738 IGHV1OR21-1A0A087WYE8 117 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 TRBV5-3A0A0A0MS03 114 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 C15orf38-AP3S2A0A0A6YYH1 394 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 PRSS51A0A1B0GVH4 220 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 TLCD2A6NGC4 264 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 URADA6NGE7 173 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 RFXANKO14593 260 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 B4GAT1O43505 415 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 HCRTR1O43613 425 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 SIGLEC6O43699 453 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 DUX1O43812 170 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 ERN1O75460 977 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 ANP32DO95626 131 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 CER1O95813 267 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 GSNP06396 782 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 SYPP08247 313 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 FAM58BPP0C7Q3 252 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 SMIM10L1P0DMW3 83 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 DDCP20711 480 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 HIST1H1TP22492 207 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 ATP5A1P25705 553 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 CERS1P27544 350 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 PI4KAP42356 2102 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 TSFMP43897 325 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 GPR3P46089 330 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 ALDH9A1P49189 494 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 ERFP50548 548 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 VSX2P58304 361 aaPredicted RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 MTPNP58546 118 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 ACTR3P61158 418 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 SNRPNP63162 240 aaKnown RBP9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 BTN3A2P78410 334 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 MS4A2Q01362 244 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLAMF1Q13291 335 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 SLC9A5Q14940 896 aa9.42□□□□□ -0.9
SOX2-OT-244ENST00000627738 NR1D2Q14995 579 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms