RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ASF1BQ9NVP2 202 aa20.95■□□□□ 0.94
SF1-220ENST00000626028 MS4A12Q9NXJ0 267 aa20.95■□□□□ 0.94
SF1-220ENST00000626028 KCMF1Q9P0J7 381 aa20.95■□□□□ 0.94
SF1-220ENST00000626028 MAP10Q9P2G4 905 aa20.95■□□□□ 0.94
SF1-220ENST00000626028 PPIEQ9UNP9 301 aaKnown RBP20.95■□□□□ 0.94
SF1-220ENST00000626028 USP9XQ93008 2570 aaPredicted RBP20.95■□□□□ 0.94
SF1-220ENST00000626028 TCP11X1B4DZS4 312 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 FOXE1O00358 373 aaPredicted RBP20.94■□□□□ 0.94
SF1-220ENST00000626028 CLDN9O95484 217 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 WDPCPO95876 746 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 FAM153BP0C7A2 387 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 ATP5A1P25705 553 aaKnown RBP20.94■□□□□ 0.94
SF1-220ENST00000626028 EEF1DP29692 281 aaKnown RBP20.94■□□□□ 0.94
SF1-220ENST00000626028 CUL3Q13618 768 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 UBAP2LQ14157 1087 aaKnown RBP20.94■□□□□ 0.94
SF1-220ENST00000626028 FAM153CQ494X1 144 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 UBE3DQ7Z6J8 389 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 ARMC10Q8N2F6 343 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 ACOT4Q8N9L9 421 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 OR1N1Q8NGS0 311 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 RGMAQ96B86 450 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 DMRT3Q9NQL9 472 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 ZNF358Q9NW07 568 aa20.94■□□□□ 0.94
SF1-220ENST00000626028 PSMC3IPQ9P2W1 217 aaPredicted RBP20.94■□□□□ 0.94
SF1-220ENST00000626028 SETXQ7Z333 2677 aaKnown RBP20.94■□□□□ 0.94
SF1-220ENST00000626028 A0A0G2JN53 185 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 A8MUI8 341 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 CTNSO60931 367 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 SIX3O95343 332 aaPredicted RBP20.93■□□□□ 0.94
SF1-220ENST00000626028 TGFB1P01137 390 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 CERS1P27544 350 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 SLC13A2Q13183 592 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 BIKQ13323 160 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 MYLK4Q86YV6 388 aaPredicted RBP20.93■□□□□ 0.94
SF1-220ENST00000626028 CATSPER1Q8NEC5 780 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 NFAM1Q8NET5 270 aaPredicted RBP20.93■□□□□ 0.94
SF1-220ENST00000626028 PHF21BQ96EK2 531 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 C19orf60Q96EN9 201 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.93■□□□□ 0.942e-9■■□□□ 11.8
SF1-220ENST00000626028 ADAP2Q9NPF8 381 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 PCTPQ9UKL6 214 aa20.93■□□□□ 0.94
SF1-220ENST00000626028 CBX6O95503 412 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 GSTA1P08263 222 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 GNLYP22749 145 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 SSR2P43308 183 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 CCNG1P51959 295 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 SERTAD2Q14140 314 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 GGTA1PQ4G0N0 100 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 OR4C11Q6IEV9 310 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 FAM180AQ6UWF9 173 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 CRLF3Q8IUI8 442 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 CYP4X1Q8N118 509 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 ZCCHC7Q8N3Z6 543 aaKnown RBP20.92■□□□□ 0.94
SF1-220ENST00000626028 TMEM151AQ8N4L1 468 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 HORMAD2Q8N7B1 307 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 B3GNT7Q8NFL0 401 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 WDR20Q8TBZ3 569 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 FAR1Q8WVX9 515 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 ATP6V1E2Q96A05 226 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 EPB41L4BQ9H329 900 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 NOL11Q9H8H0 719 aaKnown RBP20.92■□□□□ 0.94
SF1-220ENST00000626028 PRM3Q9NNZ6 103 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 PLA2G3Q9NZ20 509 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 CLDN16Q9Y5I7 305 aa20.92■□□□□ 0.94
SF1-220ENST00000626028 LRRC14BA6NHZ5 514 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 OR7A17O14581 309 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 PRAMEF2O60811 474 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 TAC1P20366 129 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 RAP1GDS1P52306 607 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 ELAVL1Q15717 326 aaKnown RBP20.91■□□□□ 0.94
SF1-220ENST00000626028 CPSF6Q16630 551 aaKnown RBP eCLIP20.91■□□□□ 0.94
SF1-220ENST00000626028 ZNF793Q6ZN11 406 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 BCORP1Q8N888 145 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 FAM47BQ8NA70 645 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 ST6GALNAC3Q8NDV1 305 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 MYRIPQ8NFW9 859 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 GRHL3Q8TE85 626 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 MTERF1Q99551 399 aaKnown RBP20.91■□□□□ 0.94
SF1-220ENST00000626028 UTP23Q9BRU9 249 aaKnown RBP20.91■□□□□ 0.94
SF1-220ENST00000626028 PHF11Q9UIL8 331 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 NTNG1Q9Y2I2 539 aa20.91■□□□□ 0.94
SF1-220ENST00000626028 SEMA3DO95025 777 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 ZIC2O95409 532 aaPredicted RBP20.9■□□□□ 0.94
SF1-220ENST00000626028 OTCP00480 354 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 RPS17P08708 135 aaKnown RBP20.9■□□□□ 0.94
SF1-220ENST00000626028 EDN3P14138 238 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 UQCRFS1P47985 274 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 CLCN2P51788 898 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 RASA2Q15283 850 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 FHL5Q5TD97 284 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 RPS19BP1Q86WX3 136 aaKnown RBP20.9■□□□□ 0.94
SF1-220ENST00000626028 BEST3Q8N1M1 668 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 TMEM132CQ8N3T6 1108 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 APCDD1LQ8NCL9 501 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 LRRN4CLQ8ND94 238 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 DNAJB8Q8NHS0 232 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 DAZLQ92904 295 aaKnown RBP20.9■□□□□ 0.94
SF1-220ENST00000626028 OR51B5Q9H339 312 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 VTI1BQ9UEU0 232 aa20.9■□□□□ 0.94
SF1-220ENST00000626028 RNF11Q9Y3C5 154 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms