RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 DDX5P17844 614 aaKnown RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 KELP23276 732 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ITGB7P26010 798 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 TPP2P29144 1249 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 C21orf33P30042 268 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 SERPINB1P30740 379 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 GRK5P34947 590 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 MAGEA8P43361 318 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC15A1P46059 708 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR1E2P47887 323 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 DGKGP49619 791 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CRISP1P54107 249 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CDC42P60953 191 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 OLR1P78380 273 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 HTRA4P83105 476 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRKCDQ05655 676 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 STARD3Q14849 445 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 GRIN2CQ14957 1233 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC5A12Q1EHB4 618 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMEM201Q5SNT2 666 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRAMEF14Q5SWL7 426 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PRAMEF13Q5VWM6 474 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 FRMPD2BQ6IN97 320 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF770Q6IQ21 691 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 REEP3Q6NUK4 255 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PNCKQ6P2M8 343 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAM92BQ6ZTR7 304 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRIM74Q86UV6 250 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRIM73Q86UV7 250 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAM129CQ86XR2 697 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CADM3Q8N126 398 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 STX19Q8N4C7 294 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 AMER2Q8N7J2 671 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR2L2Q8NH16 312 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ARRDC3Q96B67 414 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 NUS1Q96E22 293 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 NEURL3Q96EH8 262 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 DHRS1Q96LJ7 313 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAM129BQ96TA1 746 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 NLNQ9BYT8 704 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR2AG1Q9H205 316 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CPNE5Q9HCH3 593 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 FZD3Q9NPG1 666 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 CLN6Q9NWW5 311 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 SAGE1Q9NXZ1 904 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 DSPPQ9NZW4 1301 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 SCHIP1Q9P0W5 487 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 TAAR2Q9P1P5 351 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 NDOR1Q9UHB4 597 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ACSL6Q9UKU0 697 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PNMA8BQ9ULN7 279 aaPredicted RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 PAIP2BQ9ULR5 123 aaKnown RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ITM2BQ9Y287 266 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 ATP11BQ9Y2G3 1177 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 FAM32AQ9Y421 112 aaKnown RBP9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRIM17Q9Y577 477 aa9.18□□□□□ -0.94
IGHV3-54-201ENST00000622166 J3KTA2 159 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 KPNA3O00505 521 aaPredicted RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ADAP00813 363 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 TIMP1P01033 207 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 PTHP01270 115 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 IFNW1P05000 195 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 HNRNPA1P09651 372 aaKnown RBP eCLIP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ERGP11308 486 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 TGFBR1P36897 503 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ETV6P41212 452 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 FRKP42685 505 aaPredicted RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 GPR1P46091 355 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 GSTM5P46439 218 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 IDH2P48735 452 aaKnown RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 RGS6P49758 472 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ERVFC1P60507 584 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ST8SIA6P61647 398 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SNRPGP62308 76 aaKnown RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF45Q02386 682 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ST3GAL4Q11206 333 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 RPA4Q13156 261 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ARHGAP19Q14CB8 494 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 PTGES3Q15185 160 aaKnown RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 DHCR24Q15392 516 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ARMCX4Q5H9R4 360 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 IER5LQ5T953 404 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 DEPDC1Q5TB30 811 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 MEDAGQ5VYS4 303 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLX4IPQ5VYV7 408 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 KLHL17Q6TDP4 642 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ANGPTL8Q6UXH0 198 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 TMIGD1Q6UXZ0 262 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC22A16Q86VW1 577 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 TRAPPC5Q8IUR0 188 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 LYSMD2Q8IV50 215 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 ZNF547Q8IVP9 402 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 SLC44A2Q8IWA5 706 aaPredicted RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 MRPL43Q8N983 215 aaKnown RBP9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 OR9Q2Q8NGE9 314 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 CHAC2Q8WUX2 184 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 RAD51AP1Q96B01 352 aa9.17□□□□□ -0.94
IGHV3-54-201ENST00000622166 TM4SF18Q96CE8 201 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms