RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 VLDLRP98155 873 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 GSTM4Q03013 218 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ST3GAL3Q11203 375 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 HERC3Q15034 1050 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 TLR1Q15399 786 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 OR2T5Q6IEZ7 315 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 COMMD6Q7Z4G1 85 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 NLGN4XQ8N0W4 816 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 OR2T29Q8NH02 315 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.86□□□□□ -0.99
GGA3-223ENST00000621870 NAT6Q93015 286 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PREBQ9HCU5 417 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 TMEM184CQ9NVA4 438 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PISDQ9UG56 409 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 TTC3P53804 2025 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 SIPA1L3O60292 1781 aaPredicted RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 A0A0A6YYC8 382 aaPredicted RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 KIR2DS5A0A0G2JLQ3 304 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 A0A0G2JNG1 304 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 I3L1I5 382 aaPredicted RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 KIR2DS3K7RE56 304 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 RSL1D1O76021 490 aaKnown RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 SOX14O95416 240 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 HSD3B1P14060 373 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 HSD3B2P26439 372 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ZNF41P51814 821 aaPredicted RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 ERVPABLB-1P60509 514 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 CAMK1Q14012 370 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 PUM1Q14671 1186 aaKnown RBP eCLIP8.86□□□□□ -0.99
GGA3-223ENST00000621870 KIR2DS5Q14953 304 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 TMEM107Q6UX40 140 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 RABEPKQ7Z6M1 372 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 OR52E1Q8NGJ3 308 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ATOH1Q92858 354 aaPredicted RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 KHSRPQ92945 711 aaKnown RBP eCLIP8.86□□□□□ -0.99
GGA3-223ENST00000621870 PTERQ96BW5 349 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ARNT2Q9HBZ2 717 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 STARD5Q9NSY2 213 aa8.86□□□□□ -0.99
GGA3-223ENST00000621870 ZFR2Q9UPR6 939 aaKnown RBP8.86□□□□□ -0.99
GGA3-223ENST00000621870 TJP1Q07157 1748 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 A0A1B0GVT2 93 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 ASNA1O43681 348 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 B4GALT3O60512 393 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 CD2P06729 351 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 F3P13726 295 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 BMP8BP34820 402 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 EIF1AXP47813 144 aaKnown RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 SLC35F1Q5T1Q4 408 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 OR52E8Q6IFG1 317 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 MZT2AQ6P582 158 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 TRAF7Q6Q0C0 670 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 HSDL2Q6YN16 418 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 BMP8AQ7Z5Y6 402 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 APLFQ8IW19 511 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 SLC30A8Q8IWU4 369 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 LRRC25Q8N386 305 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 OR2AJ1Q8NGZ0 328 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 OR5P2Q8WZ92 322 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 CMKLR1Q99788 373 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 NLGN3Q9NZ94 848 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 DKKL1Q9UK85 242 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 COMMD3-BMI1R4GMX3 469 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 RTTNQ86VV8 2226 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 WWP2O00308 870 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 INMTO95050 263 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 EGFP01133 1207 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 IFI30P13284 250 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 PORP16435 677 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 NFATC4Q14934 902 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 SLC5A9Q2M3M2 681 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 BTBD16Q32M84 506 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 TBC1D25Q3MII6 688 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 TMEM35AQ53FP2 167 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 FAM69BQ5VUD6 431 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 TMEM225Q6GV28 225 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 NANOGP8Q6NSW7 305 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 USP30Q70CQ3 517 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 C6orf120Q7Z4R8 191 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 LAPTM4BQ86VI4 370 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 ZFAND4Q86XD8 727 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 RASGEF1AQ8N9B8 481 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 OR13J1Q8NGT2 312 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 UBASH3BQ8TF42 649 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 DIO2Q92813 273 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 NEIL2Q969S2 332 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 ASB9Q96DX5 294 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 HSPBAP1Q96EW2 488 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 RNF121Q9H920 327 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 NANOGQ9H9S0 305 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 HMG20AQ9NP66 347 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 MKLN1Q9UL63 735 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 CLEC4EQ9ULY5 219 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 ENTPD2Q9Y5L3 495 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 A6NL46 340 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 EIF3FO00303 357 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 PLD2O14939 933 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 SNX4O95219 450 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 NADKO95544 446 aaPredicted RBP8.85□□□□□ -0.99
GGA3-223ENST00000621870 HMGN1P05114 100 aa8.85□□□□□ -0.99
GGA3-223ENST00000621870 DBIP07108 87 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms