RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 NDUFAF7Q7L592 441 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 ANKRD37Q7Z713 158 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 ZCCHC7Q8N3Z6 543 aaKnown RBP17.2■□□□□ 0.34
LITAF-220ENST00000620789 GALNT16Q8N428 558 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
LITAF-220ENST00000620789 TSLPQ969D9 159 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 KCNA7Q96RP8 456 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 MAPKAP1Q9BPZ7 522 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 TRMOQ9BU70 441 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 SEMA4CQ9C0C4 833 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 ZNF700Q9H0M5 742 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 BRF2Q9HAW0 419 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 ZNF160Q9HCG1 818 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 PRDM9Q9NQV7 894 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 ARGLU1Q9NWB6 273 aaPredicted RBP17.2■□□□□ 0.34
LITAF-220ENST00000620789 KCMF1Q9P0J7 381 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 MRPS33Q9Y291 106 aaKnown RBP17.2■□□□□ 0.34
LITAF-220ENST00000620789 PCDHGA9Q9Y5G4 932 aaKnown RBP17.2■□□□□ 0.34
LITAF-220ENST00000620789 MED13Q9UHV7 2174 aa17.2■□□□□ 0.34
LITAF-220ENST00000620789 NSG1A0A0A6YYJ2 146 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 A6NL46 340 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 CYR61O00622 381 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 ULK1O75385 1050 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 BSGP35613 385 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 BTG2P78543 158 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 ZNF33BQ06732 778 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 PCOLCEQ15113 449 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 CPEB2Q7Z5Q1 589 aaKnown RBP17.19■□□□□ 0.34
LITAF-220ENST00000620789 NUDT13Q86X67 352 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 FAM47BQ8NA70 645 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 CNDP1Q96KN2 507 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 PTCHD1Q96NR3 888 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 CSF3RQ99062 836 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 HBEGFQ99075 208 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 SLC25A23Q9BV35 468 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 DDX31Q9H8H2 851 aaKnown RBP17.19■□□□□ 0.34
LITAF-220ENST00000620789 RIC8BQ9NVN3 520 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 SLC12A4Q9UP95 1085 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 MMACHCQ9Y4U1 282 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 TIMM22Q9Y584 194 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 SPACA6W5XKT8 324 aa17.19■□□□□ 0.34
LITAF-220ENST00000620789 IGKV3D-11A0A0A0MRZ8 115 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 A0A0A6YYD5 115 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 CLDN4O14493 209 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 TM9SF1O15321 606 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 EEDO75530 441 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 BPGMP07738 259 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 HSD3B1P14060 373 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 H2AFXP16104 143 aaPredicted RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 MAOAP21397 527 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 HSD3B2P26439 372 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 HTR6P50406 440 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 HNRNPFP52597 415 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 FOXA1P55317 472 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 HSD17B7P56937 341 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 CSTF3Q12996 717 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 SLAMF1Q13291 335 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 TCTN3Q6NUS6 607 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 SCUBE1Q8IWY4 988 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 ZNF595Q8IYB9 648 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 TMEM52Q8NDY8 209 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 FDCSPQ8NFU4 85 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 SREK1Q8WXA9 508 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 TUBB6Q9BUF5 446 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 MRPL1Q9BYD6 325 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 SLC25A18Q9H1K4 315 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 TMBIM4Q9HC24 238 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 MLXIPLQ9NP71 852 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 PRTFDC1Q9NRG1 225 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 NMRK1Q9NWW6 199 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 MS4A12Q9NXJ0 267 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 GPR83Q9NYM4 423 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 AHSPQ9NZD4 102 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 FBXW2Q9UKT8 454 aa17.18■□□□□ 0.34
LITAF-220ENST00000620789 G3BP2Q9UN86 482 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 TLN1Q9Y490 2541 aaKnown RBP17.18■□□□□ 0.34
LITAF-220ENST00000620789 IGHV3-20A0A0C4DH32 117 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 NPHS1O60500 1241 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 SEC24DO94855 1032 aaPredicted RBP17.17■□□□□ 0.34
LITAF-220ENST00000620789 ZWINTO95229 277 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 ITGA3P26006 1051 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 SERPINB4P48594 390 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 Q0VFX4 171 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 MYBPC3Q14896 1274 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 SFT2D3Q587I9 215 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 MRM1Q6IN84 353 aaKnown RBP17.17■□□□□ 0.34
LITAF-220ENST00000620789 CYP20A1Q6UW02 462 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 PARP9Q8IXQ6 854 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 METTL4Q8N3J2 472 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 EFCAB3Q8N7B9 438 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 GBP7Q8N8V2 638 aaPredicted RBP17.17■□□□□ 0.34
LITAF-220ENST00000620789 IMMP1LQ96LU5 166 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 WDR77Q9BQA1 342 aaPredicted RBP17.17■□□□□ 0.34
LITAF-220ENST00000620789 NUDT9Q9BW91 350 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 SHCBP1LQ9BZQ2 653 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 TNFRSF12AQ9NP84 129 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 KCNK9Q9NPC2 374 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 NECTIN3Q9NQS3 549 aa17.17■□□□□ 0.34
LITAF-220ENST00000620789 LYARQ9NX58 379 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms