RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 OR5L2Q8NGL0 311 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 OR8K3Q8NH51 312 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 CA5BP1Q8WTZ4 195 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 ANKRD49Q8WVL7 239 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 ASB5Q8WWX0 329 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 NCLNQ969V3 563 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 PWWP2AQ96N64 755 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 QRFPRQ96P65 431 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 GPR22Q99680 433 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 SPOCK3Q9BQ16 436 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 CENPKQ9BS16 269 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 TBCDQ9BTW9 1192 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 HPF1Q9NWY4 346 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 ADGRE2Q9UHX3 823 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 DAPP1Q9UN19 280 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 ERVK-11Q9UQG0 969 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 OTOGQ6ZRI0 2925 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 ZNF407Q9C0G0 2248 aa11.11□□□□□ -0.63
UPF3B-204ENST00000619445 NCF1BA6NI72 391 aaPredicted RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 A8MUA0 341 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 NCF1CA8MVU1 366 aaPredicted RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 FANCGO15287 622 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 TP73O15350 636 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 WISP3O95389 354 aaPredicted RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 IFNA16P05015 189 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 COX7A2P14406 83 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 NCF1P14598 390 aaPredicted RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 HNRNPH1P31943 449 aaKnown RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 CASP2P42575 452 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 GDF5P43026 501 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 RPL21P46778 160 aaKnown RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 PLA2G16P53816 162 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 LIM2P55344 173 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 IRF8Q02556 426 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 TBL3Q12788 808 aaKnown RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 NAB1Q13506 487 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 BMPR2Q13873 1038 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 RUNX2Q13950 521 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 FASTKD3Q14CZ7 662 aaKnown RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 HSDL2Q6YN16 418 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 GK5Q6ZS86 529 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 CHSY3Q70JA7 882 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 ZNF227Q86WZ6 799 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 AMER2Q8N7J2 671 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 STAG3L4Q8TBR4 150 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 FAM57AQ8TBR7 257 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 ASB15Q8WXK1 588 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 C14orf79Q96F83 325 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 SGCZQ96LD1 299 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 RBBP8Q99708 897 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 ERP44Q9BS26 406 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 TP63Q9H3D4 680 aaPredicted RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 SLC24A3Q9HC58 644 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 MS4A12Q9NXJ0 267 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 CD274Q9NZQ7 290 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 VTI1BQ9UEU0 232 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 PTBP2Q9UKA9 531 aaKnown RBP11.1□□□□□ -0.63
UPF3B-204ENST00000619445 RNF112Q9ULX5 631 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 PPT2Q9UMR5 302 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 SNX24Q9Y343 169 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 ASB1Q9Y576 335 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 DCHS2Q6V1P9 2916 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 F8P00451 2351 aa11.1□□□□□ -0.63
UPF3B-204ENST00000619445 FOXO6A8MYZ6 492 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 C4orf51C9J302 202 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 CYR61O00622 381 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 TPOP07202 933 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 CD1DP15813 335 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 PPP2R1BP30154 601 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 GPR143P51810 404 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 ARFIP1P53367 373 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 RAB10P61026 200 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 PCDH1Q08174 1060 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 E2F2Q14209 437 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 ZKSCAN8Q15776 578 aaPredicted RBP11.09□□□□□ -0.63
UPF3B-204ENST00000619445 RNFT1Q5M7Z0 435 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 GRTP1Q5TC63 336 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 NDUFAF5Q5TEU4 345 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 OPN5Q6U736 354 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 SLC22A16Q86VW1 577 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 GOLM1Q8NBJ4 401 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 PSD4Q8NDX1 1056 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 CHTF18Q8WVB6 975 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 UBXN10Q96LJ8 280 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 TMEM79Q9BSE2 394 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 AICDAQ9GZX7 198 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 KCNF1Q9H3M0 494 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 NMRAL1Q9HBL8 299 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 PRM3Q9NNZ6 103 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.09□□□□□ -0.63
UPF3B-204ENST00000619445 NUDT4Q9NZJ9 180 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 MYOTQ9UBF9 498 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 COPS7AQ9UBW8 275 aa11.09□□□□□ -0.63
UPF3B-204ENST00000619445 MTO1Q9Y2Z2 717 aaKnown RBP11.09□□□□□ -0.63
UPF3B-204ENST00000619445 INTS1Q8N201 2190 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms