RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 IL17FQ96PD4 163 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 DEFB118Q96PH6 123 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 OR5M11Q96RB7 305 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 SDHCQ99643 169 aaPredicted RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 SLC35A5Q9BS91 424 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 CCM2Q9BSQ5 444 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 WRAP53Q9BUR4 548 aaKnown RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 ZNF717Q9BY31 904 aaPredicted RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 ITPAQ9BY32 194 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 CEP44Q9C0F1 390 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 WDR12Q9GZL7 423 aaKnown RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 NXF2Q9GZY0 626 aaKnown RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 DCSTAMPQ9H295 470 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 BRF2Q9HAW0 419 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 DMRT3Q9NQL9 472 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 PAK6Q9NQU5 681 aaPredicted RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 PLCXD1Q9NUJ7 323 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 ACER3Q9NUN7 267 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 SCN3BQ9NY72 215 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 SPG21Q9NZD8 308 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 SH3BP4Q9P0V3 963 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 NFKBIL1Q9UBC1 381 aaPredicted RBP4.13□□□□□ -1.75
SEC22B-202ENST00000618538 RHCGQ9UBD6 479 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 FTSJ1Q9UET6 329 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 TBX21Q9UL17 535 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 PCDHGA3Q9Y5H0 932 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 SNX11Q9Y5W9 270 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 WNT6Q9Y6F9 365 aa4.13□□□□□ -1.75
SEC22B-202ENST00000618538 TRBV4-1A0A0J9YWV2 114 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 CXorf51AA0A1B0GTR3 108 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 GNG14A0A1W2PPG7 69 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 PIPSLA2A3N6 862 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 CLCA1A8K7I4 914 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 RFXAPO00287 272 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TNFRSF11BO00300 401 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 KPNA4O00629 521 aaPredicted RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 AIREO43918 545 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 AP2A2O94973 939 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 HSD3B1P14060 373 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ZNF30P17039 623 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 HOXB6P17509 224 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SYN1P17600 705 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 CBLP22681 906 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 HSD3B2P26439 372 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 GTF2E2P29084 291 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 WEE1P30291 646 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 HNF4AP41235 474 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 IDH2P48735 452 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 WDR5P61964 334 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 CYP4F2P78329 520 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SPIBQ01892 262 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TAP2Q03519 686 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ZNF33BQ06732 778 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ZNF763Q0D2J5 394 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TMEM115Q12893 351 aaPredicted RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 FOXD4Q12950 439 aaPredicted RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SELENBP1Q13228 472 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 NOGQ13253 232 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 KCNC3Q14003 757 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SCARB2Q14108 478 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SEC23BQ15437 767 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ZNF77Q15935 545 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SSX1Q16384 188 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 CARTPTQ16568 116 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 DUSP7Q16829 419 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 DGUOKQ16854 277 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TIGD6Q17RP2 521 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 MICAQ29983 383 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 MLIPQ5VWP3 458 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 STEAP3Q658P3 488 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 FAM71E1Q6IPT2 247 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 CNKSR3Q6P9H4 555 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 BRAT1Q6PJG6 821 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TMEM220Q6QAJ8 160 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 C19orf48Q6RUI8 117 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 FAM83HQ6ZRV2 1179 aaPredicted RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 LINC00299Q6ZSB3 139 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 DPPA4Q7L190 304 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 OLIG3Q7RTU3 272 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 BCDIN3DQ7Z5W3 292 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ADCK1Q86TW2 530 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 LAS2Q8IYD9 372 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 C11orf65Q8NCR3 313 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 GPR32P1Q8NGA4 272 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 OR52N2Q8NGI0 321 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 MCFD2Q8NI22 146 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 PSMA8Q8TAA3 256 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 C16orf78Q8WTQ4 265 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ZNF296Q8WUU4 475 aaPredicted RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 GTPBP3Q969Y2 492 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 ZHX1-C8orf76Q96EF9 292 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 WDR34Q96EX3 536 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TRMT61AQ96FX7 289 aaKnown RBP4.12□□□□□ -1.75
SEC22B-202ENST00000618538 Q96MT0 163 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 SLC6A18Q96N87 628 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 VPS35Q96QK1 796 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 RAD9AQ99638 391 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 TCF25Q9BQ70 676 aa4.12□□□□□ -1.75
SEC22B-202ENST00000618538 HEPHQ9BQS7 1158 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms