RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 TYMPP19971 482 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 CSKP41240 450 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SMAD3P84022 425 aaKnown RBP12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 C2orf80Q0P641 193 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 NFATC2Q13469 925 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 GALEQ14376 348 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 PTGES3Q15185 160 aaKnown RBP12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 P2RY14Q15391 338 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 CRTC2Q53ET0 693 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 CREB3L2Q70SY1 520 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 RBFAQ8N0V3 343 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 C2orf73Q8N5S3 287 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 AIFM2Q9BRQ8 373 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 MBD1Q9UIS9 605 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 ACSL6Q9UKU0 697 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SPIN1Q9Y657 262 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SLC38A8A6NNN8 435 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 ENTPD6O75354 484 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SLC22A5O76082 557 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SYPP08247 313 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SOAT1P35610 550 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 ETV6P41212 452 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF81P51508 661 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 CDH4P55283 916 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 RAB14P61106 215 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 CHIT1Q13231 466 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 B3GLCTQ6Y288 498 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF367Q7RTV3 350 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 OR4M2Q8NGB6 313 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 GDF15Q99988 308 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 SERHLQ9NQF3 203 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
PCDHA11-202ENST00000616325 PIPSLA2A3N6 862 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 KDELR3O43731 214 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 TPPPO94811 219 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ATF6P18850 670 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 NUDT1P36639 197 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 PRIM2P49643 509 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 IRF8Q02556 426 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 BCL2L1Q07817 233 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 LAMTOR1Q6IAA8 161 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 SERPINA13PQ6UXR4 307 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 HMGN2P46Q86SG4 172 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 APCDD1Q8J025 514 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ZBTB44Q8NCP5 570 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ST8SIA2Q92186 375 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 C8orf48Q96LL4 319 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 TM9SF2Q99805 663 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 MED28Q9H204 178 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 HHATLQ9HCP6 504 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 DIABLOQ9NR28 239 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 LRFN2Q9ULH4 789 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ING4Q9UNL4 249 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 MAN2B2Q9Y2E5 1009 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 SCN4AP35499 1836 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 GSAPA4D1B5 854 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 GRXCR2A6NFK2 248 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 FADS2P1A8MWK0 482 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 CASKO14936 926 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 CLDN11O75508 207 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 NCR1O76036 304 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 LAMP1P11279 417 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 SRCP12931 536 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 STK19P49842 368 aaPredicted RBP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 MORN1Q5T089 497 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 HECTD3Q5T447 861 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 BCL2L15Q5TBC7 163 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 TRIM69Q86WT6 500 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 CELF5Q8N6W0 485 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 LRRC17Q8N6Y2 441 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 AQP11Q8NBQ7 271 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 NUP50Q9UKX7 468 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 CLEC4AQ9UMR7 237 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ORC5O43913 435 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 DUSP11O75319 330 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ARSBP15848 533 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 MAGEA2P43356 314 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 PCBP2Q15366 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 XKR6Q5GH73 641 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 TOR1AIP1Q5JTV8 583 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 IER5LQ5T953 404 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 GARNL3Q5VVW2 1013 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 CCDC149Q6ZUS6 474 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 KCTD20Q7Z5Y7 419 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 MRPL10Q7Z7H8 261 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ATCAYQ86WG3 371 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 ZNF680Q8NEM1 530 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 PEX13Q92968 403 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 OPALINQ96PE5 141 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 SIGLEC11Q96RL6 698 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 CLEC4MQ9H2X3 399 aaPredicted RBP12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 TPT1P8Q9HAU6 139 aa12.84□□□□□ -0.35
PCDHA11-202ENST00000616325 MAPRE3Q9UPY8 281 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms