RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PRAMEF13Q5VWM6 474 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAPKAP1Q9BPZ7 522 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 TMEM175Q9BSA9 504 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 UFSP2Q9NUQ7 469 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 TCRBV5S1A1TA0A578 114 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 AKAP8O43823 692 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 FMO6PO60774 539 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAGEA12P43365 314 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 YBX1P67809 324 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 GK2Q14410 553 aaPredicted RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 UGT3A2Q3SY77 523 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 DNTTIP1Q9H147 329 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 XYLT2Q9H1B5 865 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 MARCH4Q9P2E8 410 aaPredicted RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ERVW-1Q9UQF0 538 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 RPP40O75818 363 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 CH25HO95992 272 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 HLA-DQB2P05538 268 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 SYPP08247 313 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC19A1P41440 591 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 HCAR3P49019 387 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 TUSC1Q2TAM9 212 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 CLLU1Q5K131 121 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF730Q6ZMV8 503 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 GDPGP1Q6ZNW5 385 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 TMEM145Q8NBT3 493 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 C10orf90Q96M02 699 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZDHHC15Q96MV8 337 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 TEFMQ96QE5 360 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 SCP2D1Q9UJQ7 156 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 CPSF4LA6NMK7 179 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 RAMP2O60895 175 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ANXA5P08758 320 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 SBK3P0C264 359 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 HOXD8P13378 290 aaPredicted RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 SDHBP21912 280 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 CEBPGP53567 150 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 IL20RBQ6UXL0 311 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF548Q8NEK5 533 aaPredicted RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ISL2Q96A47 359 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 HAPLN2Q9GZV7 340 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ASF1BQ9NVP2 202 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 MRTO4Q9UKD2 239 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 KIF1AQ12756 1690 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 PAK4O96013 591 aaPredicted RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 ADRB1P08588 477 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 JUNDP17535 347 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 HTR2AP28223 471 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 AP3S2P59780 193 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 POU4F2Q12837 409 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 ABRAXAS2Q15018 415 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 CRYBG2Q8N1P7 616 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 GIMAP1Q8WWP7 306 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 L3HYPDHQ96EM0 354 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 FCRL5Q96RD9 977 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 SPATA5L1Q9BVQ7 753 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 NKX6-2Q9C056 277 aaPredicted RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 POLR1EQ9GZS1 481 aaKnown RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 M0R082 166 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 EPOP01588 193 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 TPOP07202 933 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 FGF4P08620 206 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 NOS3P29474 1203 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 RFX2P48378 723 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 VLDLRP98155 873 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 BOP1Q14137 746 aaKnown RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 KIAA1191Q96A73 305 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF7P17097 686 aaPredicted RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 MC4RP32245 332 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 CDH4P55283 916 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 DGKZQ13574 1117 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 ADNP2Q6IQ32 1131 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 GIMAP5Q96F15 307 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 FKBP7Q9Y680 259 aa13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZFC3H1O60293 1989 aaKnown RBP13.03□□□□□ -0.32
PPP4R3B-205ENST00000616288 A0A0A6YYJ9 748 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 LOC285095A0A1B0GVY8 99 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 ENTPD6O75354 484 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 LMO2P25791 158 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 S100A12P80511 92 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 PITPNAQ00169 270 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 MGAT3Q09327 533 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 PAFAH1B3Q15102 231 aaKnown RBP13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 LY6KQ17RY6 165 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 UNC93AQ86WB7 457 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 RIMKLAQ8IXN7 391 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAL2Q969L2 176 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 INPP5KQ9BT40 448 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 GTF2A1LQ9UNN4 478 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 PLEKHA6Q9Y2H5 1048 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 IRAK3Q9Y616 596 aa13.02□□□□□ -0.32
PPP4R3B-205ENST00000616288 A0A1W2PPK0 400 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms