RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 WASH2PQ6VEQ5 465 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MTSS1LQ765P7 747 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PRSS48Q7RTY5 328 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 DCXRQ7Z4W1 244 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 NRARPQ7Z6K4 114 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MON1AQ86VX9 555 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 NRROSQ86YC3 692 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 KATNAL2Q8IYT4 538 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 LIX1Q8N485 282 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TMEM199Q8N511 208 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 SMG8Q8ND04 991 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 CCNYQ8ND76 341 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 UBASH3BQ8TF42 649 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MZB1Q8WU39 189 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ATG4AQ8WYN0 398 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 DAZAP1Q96EP5 407 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 LURAP1Q96LR2 239 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 C10orf90Q96M02 699 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ZSWIM3Q96MP5 696 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 NEDD4LQ96PU5 975 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 DCLRE1CQ96SD1 692 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 GAD1Q99259 594 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 SSX3Q99909 188 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ERVK-6Q9BXR3 956 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PPIL3Q9H2H8 161 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 FAM96AQ9H5X1 160 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 CHST7Q9NS84 486 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 FAM120CQ9NX05 1096 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 BFARQ9NZS9 450 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ERVK-18Q9QC07 812 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF639Q9UID6 485 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 SIX4Q9UIU6 781 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 USP18Q9UMW8 372 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 AAR2Q9Y312 384 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 RHBDD3Q9Y3P4 386 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 CACNA1SQ13698 1873 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 A0A096LPE4 126 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 A0A1W2PPZ6 126 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ZNF729A6NN14 1252 aaPredicted RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 NFIBO00712 420 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 DLGAP1O14490 977 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 CLDN4O14493 209 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 EIF3GO75821 320 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 AKAP3O75969 853 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MED26O95402 600 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ONECUT2O95948 504 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 F9P00740 461 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 IGHV2-70P01814 119 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 FBP1P09467 338 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 RPS3P23396 243 aaKnown RBP eCLIP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 IL1R2P27930 398 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 S100A7P31151 101 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 SFNP31947 248 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ARL3P36405 182 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ACTR1BP42025 376 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TAS2R60P59551 318 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 IKZF1Q13422 519 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 GRAPQ13588 217 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 NFYCQ13952 458 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 CAMK1Q14012 370 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 BMT2Q1RMZ1 405 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 LRRC26Q2I0M4 334 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 C3orf38Q5JPI3 329 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TEX30Q5JUR7 227 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PDZK1Q5T2W1 519 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 LAMTOR1Q6IAA8 161 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 OVOS1Q6IE37 1185 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TEX261Q6UWH6 196 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 C17orf107Q6ZR85 190 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TAS1R1Q7RTX1 841 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 LNX1Q8TBB1 728 aaPredicted RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ELMO1Q92556 727 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PIWIL1Q96J94 861 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PFDN5Q99471 154 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 WDR77Q9BQA1 342 aaPredicted RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MED18Q9BUE0 208 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PTDSS2Q9BVG9 487 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 C1QTNF1Q9BXJ1 281 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 TRIM9Q9C026 710 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 SLIRPQ9GZT3 109 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 THAP2Q9H0W7 228 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 ING2Q9H160 280 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 P2RY12Q9H244 342 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MMP27Q9H306 513 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 FOLH1BQ9HBA9 442 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PAK1IP1Q9NWT1 392 aaPredicted RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MRPL15Q9P015 296 aaKnown RBP4.54□□□□□ -1.68
LINC01109-201ENST00000603837 MORF4L1Q9UBU8 362 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 KLHL21Q9UJP4 597 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PTGDR2Q9Y5Y4 395 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 FKBP7Q9Y680 259 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 U3KQ87 197 aa4.54□□□□□ -1.68
LINC01109-201ENST00000603837 PP2D1A8MPX8 630 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 ST8SIA3O43173 380 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 LANCL1O43813 399 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 PRKRAO75569 313 aaKnown RBP4.53□□□□□ -1.68
LINC01109-201ENST00000603837 RHBDL1O75783 438 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 UCHL3P15374 230 aa4.53□□□□□ -1.68
LINC01109-201ENST00000603837 CD36P16671 472 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms