RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 MEX3BQ6ZN04 569 aaKnown RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 CEP128Q6ZU80 1094 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 ZBED8Q8IZ13 594 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 TMEM132CQ8N3T6 1108 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 PSD4Q8NDX1 1056 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 OR52N2Q8NGI0 321 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 SREK1Q8WXA9 508 aaKnown RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 ESAMQ96AP7 390 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 C14orf79Q96F83 325 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 SEC16BQ96JE7 1060 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 SERINC2Q96SA4 455 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 CSF3RQ99062 836 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 TMEM79Q9BSE2 394 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 MCMBPQ9BTE3 642 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 PITHD1Q9GZP4 211 aaPredicted RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 ENKD1Q9H0I2 346 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 DEFB127Q9H1M4 99 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 KCNF1Q9H3M0 494 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 CNOT10Q9H9A5 744 aaKnown RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 COPS7BQ9H9Q2 264 aaPredicted RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 CAB39LQ9H9S4 337 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 SMYD2Q9NRG4 433 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 DEPPQ9NTK1 212 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 DNAJC11Q9NVH1 559 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 HPF1Q9NWY4 346 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 DAPP1Q9UN19 280 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 MTO1Q9Y2Z2 717 aaKnown RBP12.24□□□□□ -0.45
RPS28-204ENST00000602140 CLCA3PQ9Y6N3 262 aa12.24□□□□□ -0.45
RPS28-204ENST00000602140 EFCAB8A8MWE9 144 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 CLGNO14967 610 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 PHGDHO43175 533 aaKnown RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 WISP3O95389 354 aaPredicted RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 CCDC166P0CW27 439 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 HPDP32754 393 aaPredicted RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 GGT5P36269 586 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 RPL21P46778 160 aaKnown RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 HSPA7P48741 367 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 NR0B1P51843 470 aaKnown RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 ELAVL1Q15717 326 aaKnown RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 ARHGAP11AQ6P4F7 1023 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 IL20RBQ6UXL0 311 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 GPSM1Q86YR5 675 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 TCAIMQ8N3R3 496 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 MARVELD2Q8N4S9 558 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 SNX31Q8N9S9 440 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 ACBD4Q8NC06 268 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 CHTF18Q8WVB6 975 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 ASB15Q8WXK1 588 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 F2RL3Q96RI0 385 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 EHD1Q9H4M9 534 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 MYOTQ9UBF9 498 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 ZNF490Q9ULM2 529 aaPredicted RBP12.23□□□□□ -0.45
RPS28-204ENST00000602140 SNX24Q9Y343 169 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 CACNA1CQ13936 2221 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 POLQO75417 2590 aa12.23□□□□□ -0.45
RPS28-204ENST00000602140 PINLYPA6NC86 204 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 SYNDIG1LA6NDD5 238 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 USP27XA6NNY8 438 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 CXorf49A8MYA2 514 aaPredicted RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 CCDC188H7C350 402 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 WWP2O00308 870 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 CTNSO60931 367 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 STK16O75716 305 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 OR6B1O95007 311 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 SOX3P41225 446 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 GNG11P61952 73 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 PPIAP62937 165 aaKnown RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 PLGLB1Q02325 96 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 TLE4Q04727 773 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 ILF2Q12905 390 aaKnown RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 DOC2AQ14183 400 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 RCN2Q14257 317 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 EFTUD2Q15029 972 aaKnown RBP eCLIP12.22□□□□□ -0.451e-12■■■■□ 23.8
RPS28-204ENST00000602140 OR4D1Q15615 310 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 TMEM211Q6ICI0 200 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 SULT1C3Q6IMI6 304 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 HSDL2Q6YN16 418 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 GPALPP1Q8IXQ4 340 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 OR2M7Q8NG81 312 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 PYROXD1Q8WU10 500 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 PTPMT1Q8WUK0 201 aaPredicted RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 DAZLQ92904 295 aaKnown RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 PTCD3Q96EY7 689 aaKnown RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 TSPAN17Q96FV3 270 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 RASL10BQ96S79 203 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 ALOXE3Q9BYJ1 711 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 TP63Q9H3D4 680 aaPredicted RBP12.22□□□□□ -0.45
RPS28-204ENST00000602140 PRDM7Q9NQW5 492 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 CD274Q9NZQ7 290 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 TXNDC16Q9P2K2 825 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 VTI1BQ9UEU0 232 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 SAR1BQ9Y6B6 198 aa12.22□□□□□ -0.45
RPS28-204ENST00000602140 A0A0G2JMM0 328 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 A0A1W2PPB8 328 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 A0A1W2PRS3 328 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 FAM166BA8MTA8 275 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 KIR3DP1A8MWS1 328 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 G3V3Y1 287 aa12.21□□□□□ -0.45
RPS28-204ENST00000602140 LDB3O75112 727 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms