RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 RAB43Q86YS6 212 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 CHTF18Q8WVB6 975 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 SORT1Q99523 831 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 ILKAPQ9H0C8 392 aaPredicted RBP18.24■□□□□ 0.51
UPF1-209ENST00000600310 TUBB1Q9H4B7 451 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 PRORYQ9H606 182 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 MANSC1Q9H8J5 431 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 HAO1Q9UJM8 370 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 MKL2Q9ULH7 1088 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 FIS1Q9Y3D6 152 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 RAP2CQ9Y3L5 183 aa18.24■□□□□ 0.51
UPF1-209ENST00000600310 CDC14CA4D256 554 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 TMEM233B4DJY2 109 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 FAM227AF5H4B4 570 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 SLC28A1O00337 649 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 HEXBP07686 556 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 FURINP09958 794 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 JAK1P23458 1154 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 OTX2P32243 289 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 EFNA3P52797 238 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 MINDY4Q4G0A6 757 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 HSP90B2PQ58FF3 399 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 ATP1A1-AS1Q5TC04 95 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 ATG16L1Q676U5 607 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 MRM1Q6IN84 353 aaKnown RBP18.23■□□□□ 0.51
UPF1-209ENST00000600310 PAGE2Q7Z2X7 111 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 COMMD6Q7Z4G1 85 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 PPP1R32Q7Z5V6 425 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 AGR3Q8TD06 166 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 TWIST2Q8WVJ9 160 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 THAP4Q8WY91 577 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 MAPKAP1Q9BPZ7 522 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 RBCK1Q9BYM8 510 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 VN1R1Q9GZP7 353 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 MED4Q9NPJ6 270 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 THAP1Q9NVV9 213 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 CCL27Q9Y4X3 112 aa18.23■□□□□ 0.51
UPF1-209ENST00000600310 CACNA1GO43497 2377 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 NPIPB8E9PQR5 432 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 CYR61O00622 381 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 KLF11O14901 512 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 TMPRSS11DO60235 418 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 SNNO75324 88 aaPredicted RBP18.22■□□□□ 0.51
UPF1-209ENST00000600310 RSL1D1O76021 490 aaKnown RBP18.22■□□□□ 0.51
UPF1-209ENST00000600310 KLK1P06870 262 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 NR1D1P20393 614 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 RHAGQ02094 409 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 IMPG1Q17R60 797 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 MFSD4BQ5TF39 518 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 C19orf48Q6RUI8 117 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 CYP20A1Q6UW02 462 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 KIRREL3Q8IZU9 778 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 C1orf52Q8N6N3 182 aaKnown RBP18.22■□□□□ 0.51
UPF1-209ENST00000600310 ZNF781Q8N8C0 355 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 PLPP5Q8NEB5 264 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 APIPQ96GX9 242 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 CRELD1Q96HD1 420 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 CATSPER2Q96P56 530 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 IP6K3Q96PC2 410 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 INTS9Q9NV88 658 aaKnown RBP18.22■□□□□ 0.51
UPF1-209ENST00000600310 LYARQ9NX58 379 aaKnown RBP18.22■□□□□ 0.51
UPF1-209ENST00000600310 SIRT5Q9NXA8 310 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 MS4A12Q9NXJ0 267 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 PHF11Q9UIL8 331 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 POLHQ9Y253 713 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 ASB4Q9Y574 426 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 HS3ST3B1Q9Y662 390 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 SPACA6W5XKT8 324 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 PKD1L2Q7Z442 2459 aa18.22■□□□□ 0.51
UPF1-209ENST00000600310 PCDH17O14917 1159 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 B4GALT2O60909 372 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 ALOX12BO75342 701 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 CDC123O75794 336 aaPredicted RBP18.21■□□□□ 0.51
UPF1-209ENST00000600310 FAM58BPP0C7Q3 252 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 TPP2P29144 1249 aaPredicted RBP18.21■□□□□ 0.51
UPF1-209ENST00000600310 HNRNPH2P55795 449 aaKnown RBP18.21■□□□□ 0.51
UPF1-209ENST00000600310 COL28A1Q2UY09 1125 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 SPIN4Q56A73 249 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 QSOX2Q6ZRP7 698 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 Q6ZSR9 355 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 GPR155Q7Z3F1 870 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 MRGPREQ86SM8 312 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 GPR180Q86V85 440 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 ZNF75CPQ92670 426 aaPredicted RBP18.21■□□□□ 0.51
UPF1-209ENST00000600310 C11orf24Q96F05 449 aaPredicted RBP18.21■□□□□ 0.51
UPF1-209ENST00000600310 CSF3RQ99062 836 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 FBXW2Q9UKT8 454 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 MMACHCQ9Y4U1 282 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 PTGDR2Q9Y5Y4 395 aa18.21■□□□□ 0.51
UPF1-209ENST00000600310 DSPP15924 2871 aaKnown RBP18.21■□□□□ 0.51
UPF1-209ENST00000600310 ARHGAP10A1A4S6 786 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 OR2W5A6NFC9 320 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 CLDN4O14493 209 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 SOCS6O14544 535 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 PIP5K1BO14986 540 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 RGS14O43566 566 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 GBAP04062 536 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 LINC00032P0C843 101 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 CPN2P22792 545 aa18.2■□□□□ 0.5
UPF1-209ENST00000600310 PRPH2P23942 346 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms