RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	ZNF595	Q8IYB9	648 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	KRT78	Q8N1N4	520 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	ZNF321P	Q8N8H1	164 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	SNX31	Q8N9S9	440 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	ACBD4	Q8NC06	268 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	PSD4	Q8NDX1	1056 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	TTL	Q8NG68	377 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	OR2L5	Q8NG80	312 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	CHTF18	Q8WVB6	975 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	F2RL3	Q96RI0	385 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	CCDC77	Q9BR77	488 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	MCMBP	Q9BTE3	642 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	NPL	Q9BXD5	320 aa	Predicted RBP	9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	DERL2	Q9GZP9	239 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	REXO4	Q9GZR2	422 aa	Known RBP	9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	ENKD1	Q9H0I2	346 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	TIMMDC1	Q9NPL8	285 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	WWOX	Q9NZC7	414 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	COQ3	Q9NZJ6	369 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	PPIE	Q9UNP9	301 aa	Known RBP	9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	MTO1	Q9Y2Z2	717 aa	Known RBP	9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	YARS2	Q9Y2Z4	477 aa	Known RBP	9.79	□□□□□ -0.84
LSM4-205	ENST00000597776	HIVEP1	P15822	2718 aa		9.79	□□□□□ -0.84
LSM4-205	ENST00000597776		A0A088AWK7	358 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	NKX2-6	A6NCS4	301 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ANKDD1B	A6NHY2	528 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	FAM90A27P	A6NNH2	459 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776		A8MVJ9	347 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	CXorf49	A8MYA2	514 aa	Predicted RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776		E7ESA3	106 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	WWP2	O00308	870 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	CCDC166	P0CW27	439 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	CD22	P20273	847 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ZNF10	P21506	573 aa	Predicted RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	GMPR	P36959	345 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	SOX3	P41225	446 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	SLC12A2	P55011	1212 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	MTTP	P55157	894 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	PPIA	P62937	165 aa	Known RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	PLGLB1	Q02325	96 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ID2	Q02363	134 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	BMPR2	Q13873	1038 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	DOC2A	Q14183	400 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	OR4D1	Q15615	310 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ELAVL1	Q15717	326 aa	Known RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ADPRM	Q3LIE5	342 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	EMC4	Q5J8M3	183 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	TRIM40	Q6P9F5	258 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ABHD17C	Q6PCB6	329 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	IL20RB	Q6UXL0	311 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	CDH24	Q86UP0	819 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	GPSM1	Q86YR5	675 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ZBED8	Q8IZ13	594 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	EID3	Q8N140	333 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	OR2M7	Q8NG81	312 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ASB15	Q8WXK1	588 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	EXT2	Q93063	718 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	C14orf79	Q96F83	325 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	RASL10B	Q96S79	203 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	SERINC2	Q96SA4	455 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	UCK2	Q9BZX2	261 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	NT5DC2	Q9H857	520 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	COPS7B	Q9H9Q2	264 aa	Predicted RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	POPDC3	Q9HBV1	291 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	NPDC1	Q9NQX5	325 aa	Predicted RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	PLSCR2	Q9NRY7	297 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	DNAJC11	Q9NVH1	559 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	HPF1	Q9NWY4	346 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	GPRC5B	Q9NZH0	403 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	MYOT	Q9UBF9	498 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	ZNF490	Q9ULM2	529 aa	Predicted RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	DAPP1	Q9UN19	280 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	MRPS33	Q9Y291	106 aa	Known RBP	9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	SNX24	Q9Y343	169 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	CLCA3P	Q9Y6N3	262 aa		9.78	□□□□□ -0.84
LSM4-205	ENST00000597776	EFCAB8	A8MWE9	144 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	RTCA	O00442	366 aa	Known RBP	9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	CLGN	O14967	610 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	CTNS	O60931	367 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	LDB3	O75112	727 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	SH3BGRL	O75368	114 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	EPOR	P19235	508 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	GSTM2	P28161	218 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	SSTR1	P30872	391 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	GGT5	P36269	586 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	HK2	P52789	917 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	POU4F1	Q01851	419 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	PDK4	Q16654	411 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	ZNF750	Q32MQ0	723 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	ARHGAP11A	Q6P4F7	1023 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	HSDL2	Q6YN16	418 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	ZNF793	Q6ZN11	406 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	UBE3D	Q7Z6J8	389 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	CCDC71	Q8IV32	467 aa	Predicted RBP	9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	TCAIM	Q8N3R3	496 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	TMEM132C	Q8N3T6	1108 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	OR5M9	Q8NGP3	310 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	PTPMT1	Q8WUK0	201 aa	Predicted RBP	9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	SEC16B	Q96JE7	1060 aa		9.77	□□□□□ -0.85
LSM4-205	ENST00000597776	RUNDC3B	Q96NL0	473 aa		9.77	□□□□□ -0.85

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