RNA–Protein interactions for RNA: ENST00000596842.5

UPF1-204, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,825 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-204ENST00000596842 NUAK1O60285 661 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 CCNB2O95067 398 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 GASTP01350 101 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ACVR2AP27037 513 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 RUNX1T1Q06455 604 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ZNF267Q14586 743 aaPredicted RBP14.61□□□□□ -0.07
UPF1-204ENST00000596842 IQCCQ4KMZ1 466 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 LIPKQ5VXJ0 399 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 PAQR6Q6TCH4 344 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 SPERTQ8NA61 448 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 GPR151Q8TDV0 419 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 C2orf15Q8WU43 125 aaKnown RBP14.61□□□□□ -0.07
UPF1-204ENST00000596842 FOPNLQ96NB1 174 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 IL17FQ96PD4 163 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 EPYCQ99645 322 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ASPNQ9BXN1 380 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 POFUT2Q9Y2G5 429 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 KLHL20Q9Y2M5 609 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 PEX16Q9Y5Y5 336 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 DNAH14Q0VDD8 3507 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ARHGAP33O14559 1287 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 SOCS5O75159 536 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 GCM2O75603 506 aaPredicted RBP14.61□□□□□ -0.07
UPF1-204ENST00000596842 BCHEP06276 602 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ANXA8P13928 327 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 SLC9A3P48764 834 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 HSPB3Q12988 150 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 MTAPQ13126 283 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 DUSP7Q16829 419 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 MICAQ29983 383 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 TRIM48Q8IWZ4 208 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 OR8J2Q8NGG1 315 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ADAMTS19Q8TE59 1207 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 OTULINQ96BN8 352 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 CFAP20Q9Y6A4 193 aaKnown RBP14.61□□□□□ -0.07
UPF1-204ENST00000596842 LRRTM2O43300 516 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 DYRK3O43781 588 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 ZNF821O75541 412 aaPredicted RBP14.61□□□□□ -0.07
UPF1-204ENST00000596842 B3GALNT1O75752 331 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 PSMA3P25788 255 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 IL12RB1P42701 662 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 VEZF1Q14119 521 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 COMMD6Q7Z4G1 85 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 OR9Q1Q8NGQ5 310 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 NECTIN4Q96NY8 510 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 BCL7BQ9BQE9 202 aa14.61□□□□□ -0.07
UPF1-204ENST00000596842 HAT1O14929 419 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 ENTPD6O75354 484 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 IL1RNP18510 177 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 MAPK8P45983 427 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 FADDQ13158 208 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 ZNF284Q2VY69 593 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 ARSIQ5FYB1 569 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 ANXA8L1Q5VT79 327 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 PNCKQ6P2M8 343 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 TSEN54Q7Z6J9 526 aaKnown RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 TMEM150AQ86TG1 271 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 TMEM25Q86YD3 366 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 PHC2Q8IXK0 858 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 SLC30A2Q9BRI3 323 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 TVP23BQ9NYZ1 205 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 KLHL3Q9UH77 587 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 SLC25A13Q9UJS0 675 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 NUPL2O15504 423 aaKnown RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 AOC2O75106 756 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 AP2A2O94973 939 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 ADRA2AP08913 450 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 TNFSF8P32971 234 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 PRKAG1P54619 331 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 AP1S2P56377 157 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 SNRPD2P62316 118 aaKnown RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 TEAD4Q15561 434 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 TCEANCQ8N8B7 351 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 LRRC20Q8TCA0 184 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 POLR2J2Q9GZM3 115 aaKnown RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 SP140LQ9H930 580 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 GPATCH2Q9NW75 528 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 ZNF282Q9UDV7 671 aaPredicted RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 TMCC3Q9ULS5 477 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 SH2B3Q9UQQ2 575 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 SYNDIG1LA6NDD5 238 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 PRAMEF25A6NGN4 478 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 A8MUA0 341 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 HOXB9P17482 250 aaPredicted RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 TIA1P31483 386 aaKnown RBP eCLIP14.6□□□□□ -0.07
UPF1-204ENST00000596842 RAE1P78406 368 aaKnown RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 MED27Q6P2C8 311 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 RBM45Q8IUH3 476 aaKnown RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 LAX1Q8IWV1 398 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 IGSF21Q96ID5 467 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 LINC00597Q9H2U6 94 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 NMNAT1Q9HAN9 279 aaPredicted RBP14.6□□□□□ -0.07
UPF1-204ENST00000596842 PCDHGA2Q9Y5H1 932 aa14.6□□□□□ -0.07
UPF1-204ENST00000596842 A0A1W2PRB8 838 aa14.59□□□□□ -0.07
UPF1-204ENST00000596842 KPNA3O00505 521 aaPredicted RBP14.59□□□□□ -0.07
UPF1-204ENST00000596842 CHMP24386 653 aa14.59□□□□□ -0.07
UPF1-204ENST00000596842 HTR2BP41595 481 aa14.59□□□□□ -0.07
UPF1-204ENST00000596842 ASMTP46597 345 aa14.59□□□□□ -0.07
UPF1-204ENST00000596842 ZNF45Q02386 682 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms