RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SRSF11Q05519 484 aaKnown RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 PDE7AQ13946 482 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 PGS1Q32NB8 556 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 COQ5Q5HYK3 327 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 CPTPQ5TA50 214 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NDUFAF5Q5TEU4 345 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 YOD1Q5VVQ6 348 aaPredicted RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 ANKRD26P1Q6NSI1 321 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 CAMKMTQ7Z624 323 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 GPR180Q86V85 440 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 MMP21Q8N119 569 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 PPCDCQ96CD2 204 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NPAS2Q99743 824 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 MAPKAP1Q9BPZ7 522 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NDC1Q9BTX1 674 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NPLQ9BXD5 320 aaPredicted RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 LYRM4Q9HD34 91 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 AKAP7Q9P0M2 348 aaPredicted RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 SH3BP4Q9P0V3 963 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 LEF1Q9UJU2 399 aaPredicted RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 DAPP1Q9UN19 280 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 ATG4BQ9Y4P1 393 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 ZNF292O60281 2723 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 A0A1W2PR48 441 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 ASPDHA6ND91 283 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 GABRR3A8MPY1 467 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 MRASO14807 208 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 AIM2O14862 343 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 FOXS1O43638 330 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 AIFM1O95831 613 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 PIM1P11309 404 aaPredicted RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 CDK4P11802 303 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 DRD2P14416 443 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 DDX5P17844 614 aaKnown RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 BUD31P41223 144 aaPredicted RBP13.87□□□□□ -0.19
VRK3-212ENST00000596814 GCGRP47871 477 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 AVPR1BP47901 424 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NUDT2P50583 147 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 RASSF2P50749 326 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 ARSFP54793 590 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 LIM2P55344 173 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NCALDP61601 193 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 TNFRSF17Q02223 184 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 RUNX2Q13950 521 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 CDCP2Q5VXM1 449 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 DTWD1Q8N5C7 304 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 OR8J2Q8NGG1 315 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 OR5T3Q8NGG3 340 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 NETO1Q8TDF5 533 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 MVB12AQ96EY5 273 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 DUSP26Q9BV47 211 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 STRADBQ9C0K7 418 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 EFCAB1Q9HAE3 211 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 ATAD3AQ9NVI7 634 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 OCIAD1Q9NX40 245 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 MS4A12Q9NXJ0 267 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 SRPK3Q9UPE1 567 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 SPACA6W5XKT8 324 aa13.87□□□□□ -0.19
VRK3-212ENST00000596814 FAM186AA6NE01 2351 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 C1orf226A1L170 272 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 B2RBV5 119 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 TMX2-CTNND1H3BSU7 103 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 ZNF749O43361 778 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 PROM1O43490 865 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 NR2F6P10588 404 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 LAMP1P11279 417 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 CPN2P22792 545 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 TLR1Q15399 786 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 ZNF385BQ569K4 471 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 PRAMEF17Q5VTA0 474 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 OR4F3Q6IEY1 312 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 DHRS13Q6UX07 377 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 RINLQ6ZS11 566 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 MSANTD1Q6ZTZ1 278 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 TTLL10Q6ZVT0 673 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 RETREG3Q86VR2 466 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 TICAM1Q8IUC6 712 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 CA13Q8N1Q1 262 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 METTL27Q8N6F8 245 aaPredicted RBP13.86□□□□□ -0.19
VRK3-212ENST00000596814 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 SLC7A6OSQ96CW6 309 aaPredicted RBP13.86□□□□□ -0.19
VRK3-212ENST00000596814 COQ8BQ96D53 544 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 MMABQ96EY8 250 aaPredicted RBP13.86□□□□□ -0.19
VRK3-212ENST00000596814 ZNF764Q96H86 408 aaPredicted RBP13.86□□□□□ -0.19
VRK3-212ENST00000596814 OR52E6Q96RD3 313 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 CMKLR1Q99788 373 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 BHLHE41Q9C0J9 482 aaPredicted RBP13.86□□□□□ -0.19
VRK3-212ENST00000596814 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.86□□□□□ -0.19
VRK3-212ENST00000596814 EHD3Q9NZN3 535 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 KCMF1Q9P0J7 381 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 PCDHA9Q9Y5H5 950 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 GVINP1Q7Z2Y8 2422 aa13.86□□□□□ -0.19
VRK3-212ENST00000596814 CROCCQ5TZA2 2017 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 H0YIG0 161 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 DSCR3O14972 297 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 TBX19O60806 448 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 PRKRAO75569 313 aaKnown RBP13.85□□□□□ -0.19
VRK3-212ENST00000596814 PHC1P78364 1004 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 ART3Q13508 389 aa13.85□□□□□ -0.19
VRK3-212ENST00000596814 IL11RAQ14626 422 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms