RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SFT2D3Q587I9 215 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 LANCL3Q6ZV70 420 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 BANPQ8N9N5 519 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 SELENOMQ8WWX9 145 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 IMMP1LQ96LU5 166 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 SLC29A3Q9BZD2 475 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 PRTFDC1Q9NRG1 225 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 PLLPQ9Y342 182 aa16.25■□□□□ 0.19
SHKBP1-212ENST00000596163 OR2W5A6NFC9 320 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 K7EM74 188 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 MASP2O00187 686 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 RTCAO00442 366 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 RGS16O15492 202 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 OR4F21O95013 312 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 SEMA3DO95025 777 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 PRR35P0CG20 571 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 TSPAN8P19075 237 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 NR1D1P20393 614 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 HMOX2P30519 316 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 TLX1P31314 330 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 EFNA3P52797 238 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 BTG2P78543 158 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 Q0VFX4 171 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 SLC13A2Q13183 592 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 SLAMF1Q13291 335 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 PLAG1Q6DJT9 500 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF793Q6ZN11 406 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 ATG14Q6ZNE5 492 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 RPS27LQ71UM5 84 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 PAGE2Q7Z2X7 111 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 HOMEZQ8IX15 550 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 SHISA5Q8N114 240 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 ZCCHC7Q8N3Z6 543 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 ZADH2Q8N4Q0 377 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 M1APQ8TC57 530 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 METTL6Q8TCB7 284 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 SREK1Q8WXA9 508 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 TSLPQ969D9 159 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 LMF1Q96S06 567 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 MESP1Q9BRJ9 268 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 EPS8L2Q9H6S3 715 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 BRF2Q9HAW0 419 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 OXSMQ9NWU1 459 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 LYARQ9NX58 379 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 PHF11Q9UIL8 331 aa16.24■□□□□ 0.19
SHKBP1-212ENST00000596163 ATMQ13315 3056 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 PPP6CO00743 305 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 PLPP1O14494 284 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 SUV39H1O43463 412 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 CTNSO60931 367 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 SEC24DO94855 1032 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 PDGFAP04085 211 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 HSD3B1P14060 373 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 CPN2P22792 545 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 HSD3B2P26439 372 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 NAGLUP54802 743 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF33BQ06732 778 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 ZNF844Q08AG5 666 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 BIKQ13323 160 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 BTBD16Q32M84 506 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 SGO1Q5FBB7 561 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 CRB2Q5IJ48 1285 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 LETMD1Q6P1Q0 360 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 PAPD4Q6PIY7 484 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 CYP20A1Q6UW02 462 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 IGFL3Q6UXB1 125 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 ISLR2Q6UXK2 745 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 GPR180Q86V85 440 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 NUDT13Q86X67 352 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 IQCKQ8N0W5 287 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 RNF175Q8N4F7 328 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 CDYL2Q8N8U2 506 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 FAM47BQ8NA70 645 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 DDX31Q9H8H2 851 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 KCMF1Q9P0J7 381 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 TEKT2Q9UIF3 430 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 FBXW2Q9UKT8 454 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 ATRXP46100 2492 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 CCDC88CQ9P219 2028 aa16.23■□□□□ 0.19
SHKBP1-212ENST00000596163 IGKV3D-11A0A0A0MRZ8 115 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 IGHV3-20A0A0C4DH32 117 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 TCRBV16S1A1N1A0A5B0 115 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 CYR61O00622 381 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 ULK1O75385 1050 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 ESRRBO95718 433 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 MYZAPP0CAP1 466 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 MAOAP21397 527 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 BUD31P41223 144 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 STX4Q12846 297 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 LIPMQ5VYY2 423 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 LRIG3Q6UXM1 1119 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 PRICKLE2Q7Z3G6 844 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 SCUBE1Q8IWY4 988 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 MAPKAP1Q9BPZ7 522 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 GSTO2Q9H4Y5 243 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 WDR41Q9HAD4 459 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 NECTIN3Q9NQS3 549 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 ADAM29Q9UKF5 820 aa16.22■□□□□ 0.19
SHKBP1-212ENST00000596163 SLC12A4Q9UP95 1085 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms