RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 GABRR3A8MPY1 467 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CCL21O00585 134 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CDK2AP1O14519 115 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CCNT2O60583 730 aaKnown RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 KERAO60938 352 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 S100BP04271 92 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 LTA4HP09960 611 aaKnown RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 ZNF10P21506 573 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CD96P40200 585 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CASP2P42575 452 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CA7P43166 264 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 RAB38P57729 211 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CHIT1Q13231 466 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 LAPTM5Q13571 262 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 OR1C1Q15619 314 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 TBCCQ15814 346 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 TRIM40Q6P9F5 258 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 XKRXQ6PP77 449 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 LRRC70Q7Z2Q7 622 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 TBC1D1Q86TI0 1168 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CDH24Q86UP0 819 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CYP4X1Q8N118 509 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 KIF2BQ8N4N8 673 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 ARMC2Q8NEN0 867 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 ADAMTS18Q8TE60 1221 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 SCMH1Q96GD3 660 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 C16orf45Q96MC5 204 aaPredicted RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 UTP23Q9BRU9 249 aaKnown RBP12.34□□□□□ -0.43
H3F3B-213ENST00000593254 CLDN16Q9Y5I7 305 aa12.34□□□□□ -0.43
H3F3B-213ENST00000593254 HMX2A2RU54 273 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 TGFBR3LH3BV60 316 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 C19orf84I3L1E1 186 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 UBXN8O00124 270 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 B3GALT2O43825 422 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 DIAPH2O60879 1101 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 MTHFD2P13995 350 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 AGAP20933 346 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 MST1P26927 711 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 ST13P50502 369 aaKnown RBP12.33□□□□□ -0.44
H3F3B-213ENST00000593254 PLA2G16P53816 162 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 HSD17B7P56937 341 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 PMP22Q01453 160 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 IRF8Q02556 426 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 PCDH1Q08174 1060 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 TERF2Q15554 542 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 WHAMMP3Q1A5X7 153 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.33□□□□□ -0.44
H3F3B-213ENST00000593254 PAGE2BQ5JRK9 111 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 ABHD17CQ6PCB6 329 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 CCDC91Q7Z6B0 441 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 RPS19BP1Q86WX3 136 aaKnown RBP12.33□□□□□ -0.44
H3F3B-213ENST00000593254 CENPLQ8N0S6 344 aaPredicted RBP12.33□□□□□ -0.44
H3F3B-213ENST00000593254 ARMC10Q8N2F6 343 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 APCDD1LQ8NCL9 501 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 TMEM52Q8NDY8 209 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 RHEBL1Q8TAI7 183 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 NXNL1Q96CM4 212 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 C14orf79Q96F83 325 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 SERINC2Q96SA4 455 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 HES7Q9BYE0 225 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 CDCP1Q9H5V8 836 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 ANKRD10Q9NXR5 420 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 DAPP1Q9UN19 280 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 ACOT9Q9Y305 439 aa12.33□□□□□ -0.44
H3F3B-213ENST00000593254 DNAJC13O75165 2243 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 CCDC189A1A4V9 331 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ASPDHA6ND91 283 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 A8MUA0 341 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 SUPT3HB4E1H0 165 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 K7EPI3 171 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 CYR61O00622 381 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 CLDN4O14493 209 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 SUPT3HO75486 399 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 NEURL1O76050 574 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 URI1O94763 535 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 HOXB4P17483 251 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 CERS1P27544 350 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 TPP2P29144 1249 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 HNRNPFP52597 415 aaKnown RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 MTTPP55157 894 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 LIM2P55344 173 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 MLF1P58340 268 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ADORA2A-AS1P86434 159 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 SRSF11Q05519 484 aaKnown RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 BMPR2Q13873 1038 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 HIST2H2ACQ16777 129 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 MROH9Q5TGP6 573 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF468Q5VIY5 522 aaPredicted RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 HIST2H2AA3Q6FI13 130 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 RELL1Q8IUW5 271 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF595Q8IYB9 648 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 HORMAD2Q8N7B1 307 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 FAM47BQ8NA70 645 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 TMEM178AQ8NBL3 297 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 B3GNT7Q8NFL0 401 aa12.32□□□□□ -0.44
H3F3B-213ENST00000593254 ZNF473Q8WTR7 871 aaKnown RBP12.32□□□□□ -0.44
H3F3B-213ENST00000593254 KCTD4Q8WVF5 259 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms