RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 ENTPD4Q9Y227 616 aa21.73■■□□□ 1.07
MBD3-211ENST00000592965 CCL21O00585 134 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 LTA4HP09960 611 aaKnown RBP21.72■■□□□ 1.07
MBD3-211ENST00000592965 CASP6P55212 293 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 LIM2P55344 173 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 PCDH1Q08174 1060 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 ART3Q13508 389 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 EFTUD2Q15029 972 aaKnown RBP eCLIP21.72■■□□□ 1.073e-7■■■□□ 15.7
MBD3-211ENST00000592965 MAPKAPK3Q16644 382 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 HIST2H2ACQ16777 129 aaPredicted RBP21.72■■□□□ 1.07
MBD3-211ENST00000592965 HIST2H2AA3Q6FI13 130 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 CCDC91Q7Z6B0 441 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.72■■□□□ 1.07
MBD3-211ENST00000592965 FAM47BQ8NA70 645 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 UBE2E3Q969T4 207 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 MAGED4Q96JG8 741 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 KCNC2Q96PR1 638 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 MS4A8Q9BY19 250 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 ADAP2Q9NPF8 381 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 PRDM7Q9NQW5 492 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 PNO1Q9NRX1 252 aaKnown RBP21.72■■□□□ 1.07
MBD3-211ENST00000592965 ZNF223Q9UK11 482 aaPredicted RBP21.72■■□□□ 1.07
MBD3-211ENST00000592965 ZNF835Q9Y2P0 537 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 PKDREJQ9NTG1 2253 aa21.72■■□□□ 1.07
MBD3-211ENST00000592965 CACNA1CQ13936 2221 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 PPP2R1BP30154 601 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 GPR143P51810 404 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 RPTNQ6XPR3 784 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 SRFBP1Q8NEF9 429 aaKnown RBP21.71■■□□□ 1.07
MBD3-211ENST00000592965 ZNF473Q8WTR7 871 aaKnown RBP21.71■■□□□ 1.07
MBD3-211ENST00000592965 TMEM125Q96AQ2 219 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 F2RL3Q96RI0 385 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 CSF3RQ99062 836 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 ROGDIQ9GZN7 287 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 TSPAN10Q9H1Z9 355 aaPredicted RBP21.71■■□□□ 1.07
MBD3-211ENST00000592965 LYRM4Q9HD34 91 aa21.71■■□□□ 1.07
MBD3-211ENST00000592965 CCDC189A1A4V9 331 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 SUPT3HB4E1H0 165 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 NPIPA5E9PKD4 350 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 UBXN8O00124 270 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 SUPT3HO75486 399 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 ZNF24P17028 368 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 SERPINB1P30740 379 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 MSH2P43246 934 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 CKAP4Q07065 602 aaKnown RBP21.7■■□□□ 1.06
MBD3-211ENST00000592965 ELAVL1Q15717 326 aaKnown RBP21.7■■□□□ 1.06
MBD3-211ENST00000592965 TMEM35AQ53FP2 167 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 Q6ZPB1 254 aaPredicted RBP21.7■■□□□ 1.06
MBD3-211ENST00000592965 LAS2Q8IYD9 372 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 ZNF808Q8N4W9 903 aaPredicted RBP21.7■■□□□ 1.06
MBD3-211ENST00000592965 POGLUT1Q8NBL1 392 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 NCLNQ969V3 563 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 TBCDQ9BTW9 1192 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 NPIPA1Q9UND3 350 aa21.7■■□□□ 1.06
MBD3-211ENST00000592965 KLF13Q9Y2Y9 288 aaPredicted RBP21.7■■□□□ 1.06
MBD3-211ENST00000592965 KLF2Q9Y5W3 355 aaPredicted RBP21.7■■□□□ 1.06
MBD3-211ENST00000592965 PRSS44E7EML9 344 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 K7EPI3 171 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 CTNSO60931 367 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 SCELO95171 688 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 C3AR1Q16581 482 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 MED27Q6P2C8 311 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 UBE3DQ7Z6J8 389 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 CLNKQ7Z7G1 428 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 TICAM1Q8IUC6 712 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 CENPLQ8N0S6 344 aaPredicted RBP21.69■■□□□ 1.06
MBD3-211ENST00000592965 TMEM132CQ8N3T6 1108 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 CPSF7Q8N684 471 aaKnown RBP21.69■■□□□ 1.06
MBD3-211ENST00000592965 CCDC77Q9BR77 488 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 ZDHHC18Q9NUE0 388 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 KCMF1Q9P0J7 381 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 OPTCQ9UBM4 332 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 SH3BGRL2Q9UJC5 107 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 FBXW2Q9UKT8 454 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 ACOT9Q9Y305 439 aa21.69■■□□□ 1.06
MBD3-211ENST00000592965 A0A087X1B8 175 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 ESYT3A0FGR9 886 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 SYCE1LA8MT33 242 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 HNRNPRO43390 633 aaKnown RBP21.68■■□□□ 1.06
MBD3-211ENST00000592965 ASNA1O43681 348 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 ITGA10O75578 1167 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 ZFAND5O76080 213 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 MTHFD2P13995 350 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 ATP5A1P25705 553 aaKnown RBP21.68■■□□□ 1.06
MBD3-211ENST00000592965 RNFT1Q5M7Z0 435 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 C8orf74Q6P047 294 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 ZNF793Q6ZN11 406 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 MRGPRGQ86SM5 289 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 SPPL2CQ8IUH8 684 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 LURAP1LQ8IV03 231 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 CYP4Z2PQ8N1L4 340 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 RHEBL1Q8TAI7 183 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 NXNL1Q96CM4 212 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 TINAGQ9UJW2 476 aa21.68■■□□□ 1.06
MBD3-211ENST00000592965 HIST1H1TP22492 207 aaPredicted RBP21.67■■□□□ 1.06
MBD3-211ENST00000592965 SLC7A5Q01650 507 aa21.67■■□□□ 1.06
MBD3-211ENST00000592965 GHDCQ8N2G8 530 aa21.67■■□□□ 1.06
MBD3-211ENST00000592965 TMEM156Q8N614 296 aa21.67■■□□□ 1.06
MBD3-211ENST00000592965 ACOT4Q8N9L9 421 aa21.67■■□□□ 1.06
MBD3-211ENST00000592965 OR7G3Q8NG95 312 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms