RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 DNAL1Q4LDG9 190 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 GAGE2EQ4V326 116 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 C1orf141Q5JVX7 400 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 HES5Q5TA89 166 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 ALS2CLQ60I27 953 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 GAGE2AQ6NT46 116 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 CLEC2AQ6UVW9 174 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 Q6ZTC4 211 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 UTS2BQ765I0 119 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 MARK2Q7KZI7 788 aaKnown RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 TRMT1LQ7Z2T5 733 aaKnown RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 TMCO2Q7Z6W1 182 aaPredicted RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 ITIH5Q86UX2 942 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 TPRA1Q86W33 373 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 PTOV1Q86YD1 416 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 LINC00346Q8IVM7 164 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 DCUN1D3Q8IWE4 304 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 IQCKQ8N0W5 287 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SLC43A2Q8N370 569 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 HDDC3Q8N4P3 179 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 ANKRD13CQ8N6S4 541 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 MLKLQ8NB16 471 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 ZNF680Q8NEM1 530 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 RDM1Q8NG50 284 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 PSMA8Q8TAA3 256 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 PYDC1Q8WXC3 89 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SMPDL3BQ92485 455 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 THRSPQ92748 146 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SEMA4DQ92854 862 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 PTERQ96BW5 349 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 STAMBPL1Q96FJ0 436 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SCRN2Q96FV2 425 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 ST6GAL2Q96JF0 529 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 FAM71F1Q96KD3 344 aaPredicted RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 ZNF582Q96NG8 517 aaPredicted RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 UHRF2Q96PU4 802 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SLC22A12Q96S37 553 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 RAD9AQ99638 391 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 KCNS3Q9BQ31 491 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 PSD2Q9BQI7 771 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 RTN4RQ9BZR6 473 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 PPIL3Q9H2H8 161 aaKnown RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 RIBC2Q9H4K1 309 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SLA2Q9H6Q3 261 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 ZNF334Q9HCZ1 680 aaPredicted RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 CD209Q9NNX6 404 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SLC35D1Q9NTN3 355 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 AGPAT5Q9NUQ2 364 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 FAIMQ9NVQ4 179 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 MIOSQ9NXC5 875 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 VPS54Q9P1Q0 977 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 NYAP2Q9P242 653 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 GAGE2DQ9UEU5 116 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 FETUBQ9UGM5 382 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 HACL1Q9UJ83 578 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 CPSF3Q9UKF6 684 aaKnown RBP3.24□□□□□ -1.89
VMP1-212ENST00000591782 NUP50Q9UKX7 468 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 GAB2Q9UQC2 676 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 SLC9A8Q9Y2E8 581 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 ASB3Q9Y575 518 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 USP16Q9Y5T5 823 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 CACNG2Q9Y698 323 aa3.24□□□□□ -1.89
VMP1-212ENST00000591782 IQSEC2Q5JU85 1478 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 ABCC10Q5T3U5 1492 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 PLEKHH2Q8IVE3 1493 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 AKAP12Q02952 1782 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 TEX13DA0A0J9YY54 714 aaPredicted RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 A0A1W2PPI3 338 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 ESYT2A0FGR8 921 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 TMEM120BA0PK00 339 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 C5orf51A6NDU8 294 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 OR6C70A6NIJ9 312 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 TCP11X1B4DZS4 312 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 E9PI62 339 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 H0YJX3 145 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 RASGRF2O14827 1237 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 PGRMC2O15173 223 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 PFDN6O15212 129 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 EIF3HO15372 352 aaKnown RBP eCLIP3.23□□□□□ -1.89
VMP1-212ENST00000591782 GRID2O43424 1007 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 CYTIPO60759 359 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 UFL1O94874 794 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 ZWINTO95229 277 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 OXSR1O95747 527 aaPredicted RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 OTCP00480 354 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 IFNB1P01574 187 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 IGKV3-20P01619 116 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 APOA1P02647 267 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 KRT8P05787 483 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 GLAP06280 429 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 IGFBP1P08833 259 aaPredicted RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 STAG3L3P0CL85 134 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 EIF2DP41214 584 aaKnown RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 MAGEA4P43358 317 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 SLC7A2P52569 658 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 HNRNPFP52597 415 aaKnown RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 SUCLG1P53597 346 aaKnown RBP3.23□□□□□ -1.89
VMP1-212ENST00000591782 IST1P53990 364 aa3.23□□□□□ -1.89
VMP1-212ENST00000591782 ATXN3P54252 364 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms