RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 KCNC2Q96PR1 638 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 FRG2BQ96QU4 278 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 SMAD5Q99717 465 aaKnown RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 TMEM109Q9BVC6 243 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 SHCBP1LQ9BZQ2 653 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 COPS7BQ9H9Q2 264 aaPredicted RBP10.82□□□□□ -0.68
VMP1-211ENST00000591315 FBXW2Q9UKT8 454 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 GRID1Q9ULK0 1009 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 DAPP1Q9UN19 280 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 TIMM22Q9Y584 194 aa10.82□□□□□ -0.68
VMP1-211ENST00000591315 IGKV3D-11A0A0A0MRZ8 115 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PSMD12O00232 456 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 MANBAO00462 879 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 SUV39H1O43463 412 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 SLC28A2O43868 658 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 MAN1A2O60476 641 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 OTCP00480 354 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 F10P00742 488 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PDYNP01213 254 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 CPA3P15088 417 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 IL10P22301 178 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PTX3P26022 381 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 BSGP35613 385 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 SSR2P43308 183 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 CCT5P48643 541 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 NAGLUP54802 743 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 FOXA1P55317 472 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 HNRNPH2P55795 449 aaKnown RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 OR4D2P58180 307 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 SKP1P63208 163 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 ACTN3Q08043 901 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 SLAMF1Q13291 335 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PCLAFQ15004 111 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 AP5B1Q2VPB7 878 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 TMEM35AQ53FP2 167 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 VWA5B1Q5TIE3 1220 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 C18orf63Q68DL7 685 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 TTC19Q6DKK2 380 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 PAPD4Q6PIY7 484 aaKnown RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 RIPOR1Q6ZS17 1223 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 GPRIN3Q6ZVF9 776 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 CHSY3Q70JA7 882 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 SCUBE1Q8IWY4 988 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 OR4N5Q8IXE1 308 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 KBTBD2Q8IY47 623 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 KIF2BQ8N4N8 673 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 CCDC63Q8NA47 563 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 DOK4Q8TEW6 326 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 RGMAQ96B86 450 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 APOPT1Q96IL0 206 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 FAM111AQ96PZ2 611 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 ZNF382Q96SR6 550 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 TBCDQ9BTW9 1192 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 MECRQ9BV79 373 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 NPLQ9BXD5 320 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 ROPN1BQ9BZX4 212 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 LHPPQ9H008 270 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 EPN3Q9H201 632 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 ROPN1Q9HAT0 212 aaPredicted RBP10.81□□□□□ -0.68
VMP1-211ENST00000591315 PRDM9Q9NQV7 894 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PRTFDC1Q9NRG1 225 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PLA2G3Q9NZ20 509 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PTGFRNQ9P2B2 879 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 PLLPQ9Y342 182 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 TSC22D4Q9Y3Q8 395 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 ATG4BQ9Y4P1 393 aa10.81□□□□□ -0.68
VMP1-211ENST00000591315 CROCCQ5TZA2 2017 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SHANK1Q9Y566 2161 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 TCRBV16S1A1N1A0A5B0 115 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 FOXE1O00358 373 aaPredicted RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 LDB3O75112 727 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SCELO95171 688 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SERPINA7P05543 415 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 JAK1P23458 1154 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SERPINB3P29508 390 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SERPINB1P30740 379 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 RAP1GDS1P52306 607 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 TGM3Q08188 693 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 KLRB1Q12918 225 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 IFT88Q13099 833 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 BTBD16Q32M84 506 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 CCDC153Q494R4 210 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 PLEKHN1Q494U1 663 aaPredicted RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 GGTA1PQ4G0N0 100 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 PRR30Q53SZ7 412 aaPredicted RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 NIPAL1Q6NVV3 410 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 ATG14Q6ZNE5 492 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 QSOX2Q6ZRP7 698 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 SLC22A9Q8IVM8 553 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 RIBC1Q8N443 379 aaPredicted RBP10.8□□□□□ -0.68
VMP1-211ENST00000591315 EFCAB3Q8N7B9 438 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 TEX19Q8NA77 164 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 Q8NA96 180 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 TCP10LQ8TDR4 215 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 AGAP11Q8TF27 550 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 REPS1Q96D71 796 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 NPAS2Q99743 824 aa10.8□□□□□ -0.68
VMP1-211ENST00000591315 TUBB6Q9BUF5 446 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms