RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CYR61O00622 381 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 PRAMEF4O60810 478 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 OR2J2O76002 312 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 PDE9AO76083 593 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 WISP3O95389 354 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-215ENST00000590696 IFNA16P05015 189 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 CERS1P27544 350 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 GGT5P36269 586 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 RPL21P46778 160 aaKnown RBP20.24■□□□□ 0.83
DDX39A-215ENST00000590696 HSPA7P48741 367 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 MTTPP55157 894 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 BMPR2Q13873 1038 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 ELAVL1Q15717 326 aaKnown RBP20.24■□□□□ 0.83
DDX39A-215ENST00000590696 PRAMEF9Q5VWM5 478 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 ABHD17CQ6PCB6 329 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 GPSM1Q86YR5 675 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 TMEM132CQ8N3T6 1108 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 PSD4Q8NDX1 1056 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 ENKD1Q9H0I2 346 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 CNOT10Q9H9A5 744 aaKnown RBP20.24■□□□□ 0.83
DDX39A-215ENST00000590696 COPS7BQ9H9Q2 264 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-215ENST00000590696 DEPPQ9NTK1 212 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 ITGB1BP2Q9UKP3 347 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 DAPP1Q9UN19 280 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 SAR1BQ9Y6B6 198 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 CLCA3PQ9Y6N3 262 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 CACNA1CQ13936 2221 aa20.24■□□□□ 0.83
DDX39A-215ENST00000590696 AKAP9Q99996 3911 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 A8MVJ9 347 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 CCDC188H7C350 402 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 CTNSO60931 367 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 TACC2O95359 2948 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 TUBB4AP04350 444 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 CCDC166P0CW27 439 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 KRTAP10-9P60411 292 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 GNG11P61952 73 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 ILF2Q12905 390 aaKnown RBP20.23■□□□□ 0.83
DDX39A-215ENST00000590696 DOC2AQ14183 400 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 XKR6Q5GH73 641 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 IL20RBQ6UXL0 311 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 CEP128Q6ZU80 1094 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 MARVELD2Q8N4S9 558 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 SNX31Q8N9S9 440 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 SREK1Q8WXA9 508 aaKnown RBP20.23■□□□□ 0.83
DDX39A-215ENST00000590696 ASB15Q8WXK1 588 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 PTCD3Q96EY7 689 aaKnown RBP20.23■□□□□ 0.83
DDX39A-215ENST00000590696 C14orf79Q96F83 325 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 F2RL3Q96RI0 385 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 DEFB127Q9H1M4 99 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 PLSCR2Q9NRY7 297 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 HPF1Q9NWY4 346 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 MYOTQ9UBF9 498 aa20.23■□□□□ 0.83
DDX39A-215ENST00000590696 SYNDIG1LA6NDD5 238 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 CXorf49A8MYA2 514 aaPredicted RBP20.22■□□□□ 0.83
DDX39A-215ENST00000590696 PHGDHO43175 533 aaKnown RBP20.22■□□□□ 0.83
DDX39A-215ENST00000590696 STK16O75716 305 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 CD1DP15813 335 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 SSTR1P30872 391 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 NR0B1P51843 470 aaKnown RBP20.22■□□□□ 0.83
DDX39A-215ENST00000590696 CBLBQ13191 982 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 RCN2Q14257 317 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 OR4D1Q15615 310 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 TMEM211Q6ICI0 200 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 SULT1C3Q6IMI6 304 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 ARHGAP11AQ6P4F7 1023 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 MEX3BQ6ZN04 569 aaKnown RBP20.22■□□□□ 0.83
DDX39A-215ENST00000590696 GPALPP1Q8IXQ4 340 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 PYROXD1Q8WU10 500 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 CHTF18Q8WVB6 975 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 DAZLQ92904 295 aaKnown RBP20.22■□□□□ 0.83
DDX39A-215ENST00000590696 TSPAN17Q96FV3 270 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 ALOXE3Q9BYJ1 711 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 PRDM7Q9NQW5 492 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 ADGRG4Q8IZF6 3080 aa20.22■□□□□ 0.83
DDX39A-215ENST00000590696 TEP1Q99973 2627 aaKnown RBP20.22■□□□□ 0.83
DDX39A-215ENST00000590696 PINLYPA6NC86 204 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 WWP2O00308 870 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 OR6B1O95007 311 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 CD22P20273 847 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 PAFAH1B1P43034 410 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 PPIAP62937 165 aaKnown RBP20.21■□□□□ 0.83
DDX39A-215ENST00000590696 TGM3Q08188 693 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 STX4Q12846 297 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 EFTUD2Q15029 972 aaKnown RBP eCLIP20.21■□□□□ 0.832e-9■■■■□ 19.6
DDX39A-215ENST00000590696 PDK4Q16654 411 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 CDKL4Q5MAI5 379 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 HSDL2Q6YN16 418 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 ACBD4Q8NC06 268 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 MORN4Q8NDC4 146 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 PTPMT1Q8WUK0 201 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-215ENST00000590696 WDR34Q96EX3 536 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 RASL10BQ96S79 203 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 KRT12Q99456 494 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 NAPGQ99747 312 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-215ENST00000590696 EFCAB11Q9BUY7 163 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 TP63Q9H3D4 680 aaPredicted RBP20.21■□□□□ 0.83
DDX39A-215ENST00000590696 CD274Q9NZQ7 290 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 TXNDC16Q9P2K2 825 aa20.21■□□□□ 0.83
DDX39A-215ENST00000590696 VTI1BQ9UEU0 232 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms