RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 OR1F2PQ96R84 312 aa11.5□□□□□ -0.57
DNMT1-218ENST00000589294 CCDC28BQ9BUN5 200 aa11.5□□□□□ -0.57
DNMT1-218ENST00000589294 YIPF2Q9BWQ6 316 aa11.5□□□□□ -0.57
DNMT1-218ENST00000589294 SORBS1Q9BX66 1292 aaKnown RBP11.5□□□□□ -0.57
DNMT1-218ENST00000589294 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
DNMT1-218ENST00000589294 ASIC5Q9NY37 505 aa11.5□□□□□ -0.57
DNMT1-218ENST00000589294 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
DNMT1-218ENST00000589294 NXT1Q9UKK6 140 aaKnown RBP11.5□□□□□ -0.57
DNMT1-218ENST00000589294 EIF3LQ9Y262 564 aaKnown RBP11.5□□□□□ -0.57
DNMT1-218ENST00000589294 GNG14A0A1W2PPG7 69 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 ZNF860A6NHJ4 632 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 PSMD12O00232 456 aaPredicted RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 CYR61O00622 381 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 TMPRSS11DO60235 418 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 DIAPH2O60879 1101 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 DNAJB6O75190 326 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 BMP10O95393 424 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 PRPS2P11908 318 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 BCKDHAP12694 445 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 PCBP4P57723 403 aaKnown RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 RAB38P57729 211 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 RPS15P62841 145 aaKnown RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 NKG7Q16617 165 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 SLC9B1Q4ZJI4 515 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 LCN10Q6JVE6 187 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 ACAD11Q709F0 780 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 COX15Q7KZN9 410 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 ZNF595Q8IYB9 648 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 FAM9CQ8IZT9 166 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 FNDC5Q8NAU1 212 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 GATA6Q92908 595 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 TBC1D20Q96BZ9 403 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 TM4SF18Q96CE8 201 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 PPP1R36Q96LQ0 422 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 MAPKAP1Q9BPZ7 522 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 EFHD1Q9BUP0 239 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 DPH1Q9BZG8 443 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 CCDC86Q9H6F5 360 aaKnown RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 WDR55Q9H6Y2 383 aaPredicted RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 KCNK13Q9HB14 408 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 NPHS2Q9NP85 383 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 C14orf105Q9NVL8 296 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 NOP53Q9NZM5 478 aaKnown RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 HCN3Q9P1Z3 774 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 KCND3Q9UK17 655 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 FARSAQ9Y285 508 aaKnown RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 MRPS33Q9Y291 106 aaKnown RBP11.49□□□□□ -0.57
DNMT1-218ENST00000589294 PCDHGA6Q9Y5G7 932 aa11.49□□□□□ -0.57
DNMT1-218ENST00000589294 GOLGA8QA0A0J9YX86 632 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 MED19A0JLT2 244 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 GOLGA8OA6NCC3 632 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 GOLGA8NF8WBI6 632 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 CLDN4O14493 209 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 GBAP04062 536 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 CAPNS1P04632 268 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 FHP07954 510 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 CYC1P08574 325 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 ZGLP1P0C6A0 271 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 DRD2P14416 443 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 CPN2P22792 545 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 JAK1P23458 1154 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 PTPN4P29074 926 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 BUD31P41223 144 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 XCR1P46094 333 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 ASMTP46597 345 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 SEC24CP53992 1094 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 RPL38P63173 70 aaKnown RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 OLR1P78380 273 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 IRX1P78414 480 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 MAT1AQ00266 395 aaKnown RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 ZNF763Q0D2J5 394 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 BIKQ13323 160 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 HEPACAMQ14CZ8 416 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 NCF4Q15080 339 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 SYT16Q17RD7 645 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 IL23RQ5VWK5 629 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 METTL21CQ5VZV1 264 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 NXNQ6DKJ4 435 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 IKBIPQ70UQ0 350 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 CPLX4Q7Z7G2 160 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 IL22RA1Q8N6P7 574 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 ZNF248Q8NDW4 579 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 SNIP1Q8TAD8 396 aaKnown RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 STT3BQ8TCJ2 826 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 C16orf78Q8WTQ4 265 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 CT55Q8WUE5 264 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 TANKQ92844 425 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 KIAA1143Q96AT1 154 aaPredicted RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 MIEF2Q96C03 454 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 RNF31Q96EP0 1072 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 PEX11GQ96HA9 241 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 FAIM2Q9BWQ8 316 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 NSRP1Q9H0G5 558 aaKnown RBP11.48□□□□□ -0.57
DNMT1-218ENST00000589294 EPN3Q9H201 632 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 WDR41Q9HAD4 459 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 TCF7L2Q9NQB0 619 aa11.48□□□□□ -0.57
DNMT1-218ENST00000589294 KLHL14Q9P2G3 628 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms