RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 DLSTP36957 453 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DDOSTP39656 456 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SLC1A2P43004 574 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 RECQLP46063 649 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 HCAR3P49019 387 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PRIM2P49643 509 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TAF6P49848 677 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ST13P50502 369 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 DGKQP52824 942 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 KCNK10P57789 538 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 HERVK_113P63132 956 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CSNK1G2P78368 415 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZNF45Q02386 682 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 LIPEQ05469 1076 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PRKCDQ05655 676 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CD47Q08722 323 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DMPKQ09013 629 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ABHD18Q0P651 414 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DNASE1L3Q13609 305 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 RAPSNQ13702 412 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 NFYCQ13952 458 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 KEAP1Q14145 624 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 FZD2Q14332 565 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TMEM132DQ14C87 1099 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ACAP2Q15057 778 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CDK10Q15131 360 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 MAPK11Q15759 364 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PPP1R3AQ16821 1122 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DPY19L1Q2PZI1 675 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PGS1Q32NB8 556 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SLC25A52Q3SY17 297 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 FAM98BQ52LJ0 330 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 CRTC2Q53ET0 693 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 DCAF10Q5QP82 559 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZNF678Q5SXM1 525 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DCAF12Q5T6F0 453 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SYT6Q5T7P8 510 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 MFSD4BQ5TF39 518 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 OTUD1Q5VV17 481 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 AGAP6Q5VW22 663 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ANKS6Q68DC2 871 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZNF470Q6ECI4 717 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SIGIRRQ6IA17 410 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PNCKQ6P2M8 343 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CES3Q6UWW8 571 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CYHR1Q6ZMK1 362 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 Q6ZSR6 202 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CHST9Q7L1S5 443 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZNF765Q7L2R6 523 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 BEND5Q7L4P6 421 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TAS2R42Q7RTR8 314 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZBTB46Q86UZ6 589 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PARGQ86W56 976 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 HORMAD1Q86X24 394 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ZDHHC13Q8IUH4 622 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 PLD3Q8IV08 490 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SLITRK4Q8IW52 837 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SLC7A5P1Q8MH63 180 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CLYBLQ8N0X4 340 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 EID3Q8N140 333 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CLEC4FQ8N1N0 589 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 DPP10Q8N608 796 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TMEM145Q8NBT3 493 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ACVR1CQ8NER5 493 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 KBTBD8Q8NFY9 601 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 OR9I1Q8NGQ6 314 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 RHOXF1Q8NHV9 184 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 NDNFQ8TB73 568 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 UBA3Q8TBC4 463 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SUN5Q8TC36 379 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SLC35F5Q8WV83 523 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 HEXDCQ8WVB3 486 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TWIST2Q8WVJ9 160 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 RORBQ92753 470 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 FBXO32Q969P5 355 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TMBIM1Q969X1 311 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 MYLPFQ96A32 169 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 VPS33AQ96AX1 596 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ISG20Q96AZ6 181 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 TBC1D20Q96BZ9 403 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 NXNL1Q96CM4 212 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 HPDLQ96IR7 371 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 SPATA17Q96L03 361 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 HSFY1Q96LI6 401 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 MUS81Q96NY9 551 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 AGAP4Q96P64 663 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TSGA13Q96PP4 275 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 UCN2Q96RP3 112 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 APOL4Q9BPW4 351 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TRAF4Q9BUZ4 470 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 CCDC32Q9BV29 185 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ERVK-6Q9BXR3 956 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 ASPSCR1Q9BZE9 553 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 CEP44Q9C0F1 390 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 NXF2Q9GZY0 626 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 MMP27Q9H306 513 aa3.98□□□□□ -1.77
LIG3-211ENST00000588713 TP63Q9H3D4 680 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 TRIT1Q9H3H1 467 aaKnown RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 TCEAL2Q9H3H9 227 aaPredicted RBP3.98□□□□□ -1.77
LIG3-211ENST00000588713 TOR3AQ9H497 397 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms