RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 FAM47BQ8NA70 645 aa13.52□□□□□ -0.25
DDX39A-208ENST00000588692 MDS2Q8NDY4 140 aa13.52□□□□□ -0.25
DDX39A-208ENST00000588692 C7orf57Q8NEG2 295 aa13.52□□□□□ -0.25
DDX39A-208ENST00000588692 NFAM1Q8NET5 270 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-208ENST00000588692 B3GNT7Q8NFL0 401 aa13.52□□□□□ -0.25
DDX39A-208ENST00000588692 TRIM44Q96DX7 344 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-208ENST00000588692 ERRFI1Q9UJM3 462 aaPredicted RBP13.52□□□□□ -0.25
DDX39A-208ENST00000588692 PPIEQ9UNP9 301 aaKnown RBP13.52□□□□□ -0.25
DDX39A-208ENST00000588692 SPACA6W5XKT8 324 aa13.52□□□□□ -0.25
DDX39A-208ENST00000588692 SVILO95425 2214 aa13.52□□□□□ -0.25
DDX39A-208ENST00000588692 GABRR3A8MPY1 467 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 CYR61O00622 381 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 CD96P40200 585 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 PIK3CBP42338 1070 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 TDGF1P3P51864 188 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 ARFIP1P53367 373 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 PHEXP78562 749 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 OR1C1Q15619 314 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 AP5B1Q2VPB7 878 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 KHDRBS2Q5VWX1 349 aaKnown RBP13.51□□□□□ -0.25
DDX39A-208ENST00000588692 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 ARMC10Q8N2F6 343 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 REPS1Q96D71 796 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 C5orf34Q96MH7 638 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 CENPKQ9BS16 269 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 ACTR8Q9H981 624 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 ADAP2Q9NPF8 381 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 CPSF2Q9P2I0 782 aaKnown RBP13.51□□□□□ -0.25
DDX39A-208ENST00000588692 PCDHGA11Q9Y5H2 935 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 CLDN16Q9Y5I7 305 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 UTP20O75691 2785 aaKnown RBP13.51□□□□□ -0.25
DDX39A-208ENST00000588692 ZGRF1Q86YA3 2104 aa13.51□□□□□ -0.25
DDX39A-208ENST00000588692 WIPF3A6NGB9 483 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 H0YIV9 168 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 FCHO1O14526 889 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 CTNSO60931 367 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 MYO1DO94832 1006 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 LDLRP01130 860 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 ABHD2P08910 425 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 CD46P15529 392 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 HIST1H1TP22492 207 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-208ENST00000588692 ATP5A1P25705 553 aaKnown RBP13.5□□□□□ -0.25
DDX39A-208ENST00000588692 SSR2P43308 183 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 CLCN2P51788 898 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
DDX39A-208ENST00000588692 OC90Q02509 493 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-208ENST00000588692 GTF2H2Q13888 395 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 ELAVL1Q15717 326 aaKnown RBP13.5□□□□□ -0.25
DDX39A-208ENST00000588692 GTF2H2CQ6P1K8 395 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 ZNF793Q6ZN11 406 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 UBE3DQ7Z6J8 389 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 MYLK4Q86YV6 388 aaPredicted RBP13.5□□□□□ -0.25
DDX39A-208ENST00000588692 KIF2BQ8N4N8 673 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 ACOT4Q8N9L9 421 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 TMEM178AQ8NBL3 297 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 APCDD1LQ8NCL9 501 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 TMEM52Q8NDY8 209 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 DCAKDQ8WVC6 231 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 SCMH1Q96GD3 660 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 SIGLEC12Q96PQ1 595 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 CSF3RQ99062 836 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 DEFB126Q9BYW3 111 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 CDCP1Q9H5V8 836 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 ICE1Q9Y2F5 2266 aa13.5□□□□□ -0.25
DDX39A-208ENST00000588692 EXOC1LA0A1B0GW35 172 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 A8MUA0 341 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 POC1B-GALNT4F8VUJ3 575 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 STX16-NPEPL1H3BU86 382 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 STX16O14662 325 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 MAN1A2O60476 641 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TGFB1P01137 390 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TPP2P29144 1249 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 EEF1DP29692 281 aaKnown RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TRHRP34981 398 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 PER3P56645 1201 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 MLF1P58340 268 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 SERTAD2Q14140 314 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 C4orf17Q53FE4 359 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 DEPDC1Q5TB30 811 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 LGSNQ5TDP6 509 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TRMT10CQ7L0Y3 403 aaKnown RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 GOLGA7Q7Z5G4 137 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 CNPY4Q8N129 248 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 PLD6Q8N2A8 252 aaKnown RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TMEM132CQ8N3T6 1108 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 HUS1BQ8NHY5 278 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TRIM45Q9H8W5 580 aaPredicted RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 IPPKQ9H8X2 491 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 DMRT3Q9NQL9 472 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 PNO1Q9NRX1 252 aaKnown RBP13.49□□□□□ -0.25
DDX39A-208ENST00000588692 MS4A12Q9NXJ0 267 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 ANKRD10Q9NXR5 420 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 KCMF1Q9P0J7 381 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 LRFN1Q9P244 771 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 XPR1Q9UBH6 696 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 NFU1Q9UMS0 254 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 MAST4O15021 2626 aa13.49□□□□□ -0.25
DDX39A-208ENST00000588692 TRBV11-1A0A0K0K1C0 115 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms