RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 SORBS1Q9BX66 1292 aaKnown RBP22.03■■□□□ 1.12
CHAF1A-205ENST00000587580 PPCSQ9HAB8 311 aa22.03■■□□□ 1.12
CHAF1A-205ENST00000587580 LYRM4Q9HD34 91 aa22.03■■□□□ 1.12
CHAF1A-205ENST00000587580 PLA2G3Q9NZ20 509 aa22.03■■□□□ 1.12
CHAF1A-205ENST00000587580 TEKT2Q9UIF3 430 aa22.03■■□□□ 1.12
CHAF1A-205ENST00000587580 PCDHGA10Q9Y5H3 936 aa22.03■■□□□ 1.12
CHAF1A-205ENST00000587580 CNTRLQ7Z7A1 2325 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 NBASA2RRP1 2371 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 SAGE2PA6NJ88 616 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 A8MUA0 341 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 SCELO95171 688 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 ZIC2O95409 532 aaPredicted RBP22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 GSTA1P08263 222 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 HSD17B7P56937 341 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 ZNF33BQ06732 778 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 SLC13A2Q13183 592 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 TLR1Q15399 786 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 FCRLBQ6BAA4 426 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 CLNKQ7Z7G1 428 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 WDR20Q8TBZ3 569 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 EPS8L3Q8TE67 593 aaKnown RBP22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 ZNF483Q8TF39 744 aaPredicted RBP22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 RGMAQ96B86 450 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 MAPKAP1Q9BPZ7 522 aa22.02■■□□□ 1.12
CHAF1A-205ENST00000587580 SHANK1Q9Y566 2161 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 A0A1W2PPM1 405 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 CYR61O00622 381 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 PLPP1O14494 284 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 VPS4BO75351 444 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 F10P00742 488 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 HSD17B3P37058 310 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 NEK2P51955 445 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 OR4C11Q6IEV9 310 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 TDRPQ86YL5 185 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 CISD2Q8N5K1 135 aaKnown RBP22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 CATSPER1Q8NEC5 780 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 SNRNP40Q96DI7 357 aaKnown RBP22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 C1QTNF3Q9BXJ4 246 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 KCMF1Q9P0J7 381 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 FBXW2Q9UKT8 454 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 VPS4AQ9UN37 437 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 SPACA6W5XKT8 324 aa22.01■■□□□ 1.11
CHAF1A-205ENST00000587580 FOXO6A8MYZ6 492 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 ESPNB1AK53 854 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 TGFBR3LH3BV60 316 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 DLX3O60479 287 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 WDPCPO95876 746 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 KRT15P19012 456 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 TSPAN8P19075 237 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 PTX3P26022 381 aaPredicted RBP22■■□□□ 1.11
CHAF1A-205ENST00000587580 TSFMP43897 325 aaKnown RBP22■■□□□ 1.11
CHAF1A-205ENST00000587580 CDH13P55290 713 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 TAS2R50P59544 299 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 HERVK_113P63132 956 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 GGTA1PQ4G0N0 100 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 TTC19Q6DKK2 380 aaPredicted RBP22■■□□□ 1.11
CHAF1A-205ENST00000587580 H3F3CQ6NXT2 135 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 MILR1Q7Z6M3 343 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 OR4F6Q8NGB9 312 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 HAS2Q92819 552 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 MTFMTQ96DP5 389 aaKnown RBP22■■□□□ 1.11
CHAF1A-205ENST00000587580 C19orf60Q96EN9 201 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 ZNF354BQ96LW1 612 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 ERVK-6Q9BXR3 956 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 RNF32Q9H0A6 362 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 PNO1Q9NRX1 252 aaKnown RBP22■■□□□ 1.11
CHAF1A-205ENST00000587580 NOL12Q9UGY1 213 aaKnown RBP eCLIP22■■□□□ 1.111e-9■■■■■ 32.2
CHAF1A-205ENST00000587580 CLDN16Q9Y5I7 305 aa22■■□□□ 1.11
CHAF1A-205ENST00000587580 V9GYY5 206 aaPredicted RBP22■■□□□ 1.11
CHAF1A-205ENST00000587580 FOXE1O00358 373 aaPredicted RBP21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 GLRA3O75311 464 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 ETHE1O95571 254 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 OTCP00480 354 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 CPN2P22792 545 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 ATP5F1P24539 256 aaPredicted RBP21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 FRG2Q64ET8 278 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 CRLF3Q8IUI8 442 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 KIF2BQ8N4N8 673 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 GALNT11Q8NCW6 608 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 OR1N1Q8NGS0 311 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 ELP5Q8TE02 316 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 TMEM237Q96Q45 408 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 FRG2BQ96QU4 278 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 ASF1BQ9NVP2 202 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 STMN3Q9NZ72 180 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 DCDC2Q9UHG0 476 aa21.99■■□□□ 1.11
CHAF1A-205ENST00000587580 A0A1B0GTL3 188 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 PPP6CO00743 305 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 MYO1DO94832 1006 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 SUPT7LO94864 414 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 PPP2R1BP30154 601 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 TNFSF10P50591 281 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 ARFIP1P53367 373 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 CLCQ05315 142 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 IFT88Q13099 833 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 SLAMF1Q13291 335 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 CUL3Q13618 768 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 MEP1AQ16819 746 aa21.98■■□□□ 1.11
CHAF1A-205ENST00000587580 ACER2Q5QJU3 275 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms