RNA–Protein interactions for RNA: ENST00000587451.2

CACNA1A-208, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-208ENST00000587451 NDPQ00604 133 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 CAPRIN1Q14444 709 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 C17orf107Q6ZR85 190 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 MEX3DQ86XN8 651 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 CLEC1AQ8NC01 280 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 RBM18Q96H35 190 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 LINC00167Q96N53 147 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 RAB3IPQ96QF0 476 aaPredicted RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 ANKRD2Q9GZV1 360 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 S100A14Q9HCY8 104 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 NOCTQ9UK39 431 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 GMEB2Q9UKD1 530 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 ZNF346Q9UL40 294 aaKnown RBP3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 SLC6A5Q9Y345 797 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 PCDHGA1Q9Y5H4 931 aa3.22□□□□□ -1.89
CACNA1A-208ENST00000587451 FAM205AQ6ZU69 1335 aa3.21□□□□□ -1.89
CACNA1A-208ENST00000587451 A0A0B4J203 849 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 A0A1W2PQ72 361 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 FOXI3A8MTJ6 420 aaPredicted RBP3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 FAM220BPB1ANY3 271 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 H0Y9J4 135 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 VENTXO95231 258 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 HCKP08631 526 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 PTAFRP25105 342 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 BACE1P56817 501 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 GSTO1P78417 241 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 ABRQ12979 859 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 TWISTNBQ3B726 338 aaPredicted RBP3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 PLPP4Q5VZY2 271 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 FAM91A1Q658Y4 838 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 PCGF5Q86SE9 256 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 SMPDL3AQ92484 453 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 BPIFA2Q96DR5 249 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 LIME1Q9H400 295 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 RSPH14Q9UHP6 348 aa3.21□□□□□ -1.9
CACNA1A-208ENST00000587451 CLN5O75503 358 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 PIGRP01833 764 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 SKILP12757 684 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ZBTB25P24278 435 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ADARP55265 1226 aaKnown RBP3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 RPS27AP62979 156 aaKnown RBP3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 CEACAM7Q14002 265 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 CRMP1Q14194 572 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 SLC22A6Q4U2R8 563 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 NLRP14Q86W24 1093 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 TICAM2Q86XR7 235 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ZNF781Q8N8C0 355 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 RNF149Q8NC42 400 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 OR6T1Q8NGN1 323 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 C8orf46Q8TAG6 207 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 PHYHIPLQ96FC7 376 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ZNF274Q96GC6 653 aaPredicted RBP3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 FER1L6-AS2Q96M78 137 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ASB8Q9H765 288 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 LMAN1LQ9HAT1 526 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 MED17Q9NVC6 651 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ADAM22Q9P0K1 906 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 ANAPC5Q9UJX4 755 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 IKZF3Q9UKT9 509 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 SH3GLB1Q9Y371 365 aa3.2□□□□□ -1.9
CACNA1A-208ENST00000587451 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 HTR3EA5X5Y0 456 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ANHXE9PGG2 379 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 SRPX2O60687 465 aaPredicted RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 FRAT2O75474 233 aaPredicted RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 RHBDL1O75783 438 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 GBAP04062 536 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 MGMTP16455 207 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ADRA2CP18825 462 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 PSMB4P28070 264 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 KRT20P35900 424 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ALDH3B1P43353 468 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 CRKLP46109 303 aaKnown RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 RGRP47804 291 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 NPBWR1P48145 328 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 CAPZA1P52907 286 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ZNF79Q15937 498 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 PCK2Q16822 640 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 RPUSD3Q6P087 351 aaKnown RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ALKBH5Q6P6C2 394 aaKnown RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 Q6ZVH6 145 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ZNF444Q8N0Y2 327 aaPredicted RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 CCDC191Q8NCU4 936 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 CD99L2Q8TCZ2 262 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 RIT1Q92963 219 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 SLC35C1Q96A29 364 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ZBED6CLQ96FA7 236 aaPredicted RBP3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 PPP1R16AQ96I34 528 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 CCM2Q9BSQ5 444 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 TEX13BQ9BXU2 312 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 FAM129AQ9BZQ8 928 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ST6GALNAC4Q9H4F1 302 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 PDFQ9HBH1 243 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 SENP1Q9P0U3 644 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 DHRS4-AS1Q9P1J3 65 aa3.19□□□□□ -1.9
CACNA1A-208ENST00000587451 ZNF487B1APH4 448 aa3.18□□□□□ -1.9
CACNA1A-208ENST00000587451 LRRTM2O43300 516 aa3.18□□□□□ -1.9
CACNA1A-208ENST00000587451 ZNF253O75346 499 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms