RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CLNKQ7Z7G1 428 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 GPALPP1Q8IXQ4 340 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ZZZ3Q8IYH5 903 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 RASGEF1CQ8N431 466 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 TBC1D19Q8N5T2 526 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 FAM47BQ8NA70 645 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ARMC2Q8NEN0 867 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PTPMT1Q8WUK0 201 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 SLCO2A1Q92959 643 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 NINJ1Q92982 152 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 GAL3ST3Q96A11 431 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 MAGOHBQ96A72 148 aaKnown RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 SCYL1Q96KG9 808 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 AIF1LQ9BQI0 150 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 GPATCH1Q9BRR8 931 aaKnown RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ADAP2Q9NPF8 381 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PRTFDC1Q9NRG1 225 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 HPF1Q9NWY4 346 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 TRMT1Q9NXH9 659 aaKnown RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 SPRR3Q9UBC9 169 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ST6GALNAC2Q9UJ37 374 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 ERVK-11Q9UQG0 969 aa11.01□□□□□ -0.65
BRCA1-225ENST00000586385 PHF3Q92576 2039 aaKnown RBP11.01□□□□□ -0.65
BRCA1-225ENST00000586385 OR14I1A6ND48 311 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 LRIT2A6NDA9 550 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 URADA6NGE7 173 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 BCKDKO14874 412 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 PROM1O43490 865 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 ENO2P09104 434 aaPredicted RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 CCL3P10147 92 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 GDF5P43026 501 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 ZFP36L2P47974 494 aaKnown RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 DNASE1L1P49184 302 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 RAB38P57729 211 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 CCZ1BP86790 482 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 CCZ1P86791 482 aaPredicted RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 FOLH1Q04609 750 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 CEBPEQ15744 281 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 HYAL4Q2M3T9 481 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 ADPRMQ3LIE5 342 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 TEDDM1Q5T9Z0 273 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 TRMT10BQ6PF06 316 aaKnown RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 ARSKQ6UWY0 536 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 RGS9BPQ6ZS82 235 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 GALNT7Q86SF2 657 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 KLHDC8AQ8IYD2 350 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 CLYBLQ8N0X4 340 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 FAM109AQ8N4B1 249 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 OR10Q1Q8NGQ4 319 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 ATL1Q8WXF7 558 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 ASB15Q8WXK1 588 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 PDLIM5Q96HC4 596 aaKnown RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 NPLQ9BXD5 320 aaPredicted RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 RASSF1Q9NS23 344 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 TUBA8Q9NY65 449 aaPredicted RBP11□□□□□ -0.65
BRCA1-225ENST00000586385 PLEKHA6Q9Y2H5 1048 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 VWA7Q9Y334 891 aa11□□□□□ -0.65
BRCA1-225ENST00000586385 NPEPPSL1A6NEC2 478 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 KDM4EB2RXH2 506 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 ACOT7O00154 380 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 AQP7O14520 342 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 ERI3O43414 337 aaKnown RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 ZNF37AP17032 561 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 CNR1P21554 472 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 CERS1P27544 350 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 SLC6A12P48065 614 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 LIM2P55344 173 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 SLC13A2Q13183 592 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 PDAP1Q13442 181 aaKnown RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 ZNF460Q14592 562 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 ELAVL1Q15717 326 aaKnown RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 NDUFAF5Q5TEU4 345 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 CCDC137Q6PK04 289 aaKnown RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 PAOXQ6QHF9 649 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 SLC22A16Q86VW1 577 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 GPATCH11Q8N954 259 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 RELL2Q8NC24 303 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 CERS2Q96G23 380 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 PWWP2AQ96N64 755 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 FAM173AQ9BQD7 235 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 CCDC77Q9BR77 488 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 POLDIP3Q9BY77 421 aaKnown RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 TRIM54Q9BYV2 358 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 IL1RL2Q9HB29 575 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 PROK2Q9HC23 129 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 SH2D2AQ9NP31 389 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 CRIM1Q9NZV1 1036 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 DYRK1BQ9Y463 629 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 ATG4BQ9Y4P1 393 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 PSAT1Q9Y617 370 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 KCNE2Q9Y6J6 123 aa10.99□□□□□ -0.65
BRCA1-225ENST00000586385 MAP1AP78559 2803 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-225ENST00000586385 HRNRQ86YZ3 2850 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-225ENST00000586385 ATP6AP2A0A1C7CYW4 349 aa10.98□□□□□ -0.65
BRCA1-225ENST00000586385 LRRC3CA6NJW4 275 aa10.98□□□□□ -0.65
BRCA1-225ENST00000586385 FIGNL2A6NMB9 653 aa10.98□□□□□ -0.65
BRCA1-225ENST00000586385 ATP6AP2O75787 350 aa10.98□□□□□ -0.65
BRCA1-225ENST00000586385 ETHE1O95571 254 aa10.98□□□□□ -0.65
BRCA1-225ENST00000586385 RFPL3SP0C7P2 107 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms