RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 MIEF2Q96C03 454 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 THOC1Q96FV9 657 aaKnown RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 OR1F2PQ96R84 312 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 EBPLQ9BY08 206 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 FAM117AQ9C073 453 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 NSRP1Q9H0G5 558 aaKnown RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 SLC26A1Q9H2B4 701 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 WDR41Q9HAD4 459 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 CTSFQ9UBX1 484 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 GIMAP2Q9UG22 337 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 NXT1Q9UKK6 140 aaKnown RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 DAPP1Q9UN19 280 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 FARSAQ9Y285 508 aaKnown RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 MRPS33Q9Y291 106 aaKnown RBP12.87□□□□□ -0.35
VMP1-203ENST00000586245 PADI2Q9Y2J8 665 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 SDK2Q58EX2 2172 aa12.87□□□□□ -0.35
VMP1-203ENST00000586245 CACNA1AO00555 2505 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 IGLV3-12A0A075B6K2 115 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 LOC101059948A0A1B0GTJ6 334 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 ZNF195O14628 629 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 DNAJB6O75190 326 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 JAK1P23458 1154 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 TLX1P31314 330 aaPredicted RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 DLSTP36957 453 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 GSTM5P46439 218 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 TRA2BP62995 288 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 ERVK-8P63133 956 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 RAE1P78406 368 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 EMX2Q04743 252 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 ZNF763Q0D2J5 394 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 DNASE1L3Q13609 305 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 TGIF1Q15583 401 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 NKG7Q16617 165 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 SLC9B1Q4ZJI4 515 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 VWA2Q5GFL6 755 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 MRM1Q6IN84 353 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 MRPL14Q6P1L8 145 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 EPGNQ6UW88 154 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 FAM47BQ8NA70 645 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 CEP70Q8NHQ1 597 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 STT3BQ8TCJ2 826 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 ACTRT2Q8TDY3 377 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 KCNE4Q8WWG9 221 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 TBC1D20Q96BZ9 403 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 C11orf24Q96F05 449 aaPredicted RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 NAF1Q96HR8 494 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 MAELQ96JY0 434 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 MAPKAP1Q9BPZ7 522 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 EFHD1Q9BUP0 239 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 FAIM2Q9BWQ8 316 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 GPR87Q9BY21 358 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 RBCK1Q9BYM8 510 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 TGIF2Q9GZN2 237 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 WDR55Q9H6Y2 383 aaPredicted RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 WDR54Q9H977 334 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 NOP53Q9NZM5 478 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 EIF3LQ9Y262 564 aaKnown RBP12.86□□□□□ -0.35
VMP1-203ENST00000586245 ASB4Q9Y574 426 aa12.86□□□□□ -0.35
VMP1-203ENST00000586245 SCN3AQ9NY46 2000 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 GMNCA6NCL1 334 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 CLDN4O14493 209 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 TLX3O43711 291 aaPredicted RBP12.85□□□□□ -0.35
VMP1-203ENST00000586245 BMP10O95393 424 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 FHP07954 510 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 ZGLP1P0C6A0 271 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 PRR35P0CG20 571 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 NR2F6P10588 404 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 ACPPP15309 386 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 IDH3AP50213 366 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 HNRNPH2P55795 449 aaKnown RBP12.85□□□□□ -0.35
VMP1-203ENST00000586245 TAS2R50P59544 299 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 HEPACAMQ14CZ8 416 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 MINDY4Q4G0A6 757 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 IL23RQ5VWK5 629 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 LARP4Q71RC2 724 aaKnown RBP eCLIP12.85□□□□□ -0.35
VMP1-203ENST00000586245 SPATA19Q7Z5L4 167 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 ZC3H7AQ8IWR0 971 aaKnown RBP12.85□□□□□ -0.35
VMP1-203ENST00000586245 PRSS58Q8IYP2 241 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 RFWD2Q8NHY2 731 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 CDC26Q8NHZ8 85 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 C16orf78Q8WTQ4 265 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 FCRL1Q96LA6 429 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 C1orf50Q9BV19 199 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 DPH1Q9BZG8 443 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 SOX17Q9H6I2 414 aaPredicted RBP12.85□□□□□ -0.35
VMP1-203ENST00000586245 GPN2Q9H9Y4 310 aaPredicted RBP12.85□□□□□ -0.35
VMP1-203ENST00000586245 TCF7L2Q9NQB0 619 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 KCMF1Q9P0J7 381 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 DCTN4Q9UJW0 460 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 PTRH2Q9Y3E5 179 aaKnown RBP12.85□□□□□ -0.35
VMP1-203ENST00000586245 ATG4BQ9Y4P1 393 aa12.85□□□□□ -0.35
VMP1-203ENST00000586245 A0A0G2JND7 137 aa12.84□□□□□ -0.35
VMP1-203ENST00000586245 BLACEA4D250 179 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms