RNA–Protein interactions for RNA: ENST00000585630.5

CIRBP-204, Transcript of cold inducible RNA binding protein, human

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-204	ENST00000585630	CLDN4	O14493	209 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	CDK2AP1	O14519	115 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	RASAL1	O95294	804 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	SLU7	O95391	586 aa	Known RBP	15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	LDLR	P01130	860 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	PCNA	P12004	261 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	CNTF	P26441	200 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	RCN2	Q14257	317 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	PCBP2	Q15366	365 aa	Known RBP eCLIP	15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	ZNF766	Q5HY98	468 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	METTL2B	Q6P1Q9	378 aa	Known RBP	15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	UBE3D	Q7Z6J8	389 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	PLD6	Q8N2A8	252 aa	Known RBP	15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	ARMC10	Q8N2F6	343 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	APCDD1L	Q8NCL9	501 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	B3GNT7	Q8NFL0	401 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	SIGLEC12	Q96PQ1	595 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	TBCD	Q9BTW9	1192 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	LYRM4	Q9HD34	91 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	ADAP2	Q9NPF8	381 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	CPSF2	Q9P2I0	782 aa	Known RBP	15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	NFU1	Q9UMS0	254 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	PPIE	Q9UNP9	301 aa	Known RBP	15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	TSC22D4	Q9Y3Q8	395 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	ANGPTL3	Q9Y5C1	460 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	IKBKG	Q9Y6K9	419 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630	CROCC	Q5TZA2	2017 aa		15.43	■□□□□ 0.06
CIRBP-204	ENST00000585630		A0A087WUV0	522 aa	Predicted RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	LRRC14B	A6NHZ5	514 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	UGDH	O60701	494 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	KRT38	O76015	456 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	MYO1D	O94832	1006 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	CRYAB	P02511	175 aa	Known RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	HIST1H1T	P22492	207 aa	Predicted RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	PPP2R1B	P30154	601 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	CD96	P40200	585 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	PIK3CB	P42338	1070 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	PIK3CG	P48736	1102 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	SLC13A2	Q13183	592 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	OR1C1	Q15619	314 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	KHDRBS2	Q5VWX1	349 aa	Known RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	LIPJ	Q5W064	366 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	RPS19BP1	Q86WX3	136 aa	Known RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	DCAKD	Q8WVC6	231 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	CMTM7	Q96FZ5	175 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	SCMH1	Q96GD3	660 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	C5orf34	Q96MH7	638 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	DMRT3	Q9NQL9	472 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	ANKRD10	Q9NXR5	420 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	KCMF1	Q9P0J7	381 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	XPR1	Q9UBH6	696 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	PLEKHB1	Q9UF11	243 aa	Predicted RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	ADGRE2	Q9UHX3	823 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	TNPO3	Q9Y5L0	923 aa	Known RBP	15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	CENPE	Q02224	2701 aa		15.42	■□□□□ 0.06
CIRBP-204	ENST00000585630	TRBV11-1	A0A0K0K1C0	115 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	WIPF3	A6NGB9	483 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630		A8MUA0	341 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	RTCA	O00442	366 aa	Known RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	NEURL1	O76050	574 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ABHD2	P08910	425 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ATP5A1	P25705	553 aa	Known RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	TPP2	P29144	1249 aa	Predicted RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	SSR2	P43308	183 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	PMP22	Q01453	160 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	GTF2H2	Q13888	395 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ELAVL1	Q15717	326 aa	Known RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	TSNAXIP1	Q2TAA8	658 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	C4orf17	Q53FE4	359 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	GTF2H2C	Q6P1K8	395 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	CHSY3	Q70JA7	882 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	GOLGA7	Q7Z5G4	137 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	CLNK	Q7Z7G1	428 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	MYLK4	Q86YV6	388 aa	Predicted RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	IFT20	Q8IY31	132 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ACOT4	Q8N9L9	421 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	DNAJB8	Q8NHS0	232 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	HUS1B	Q8NHY5	278 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	VMP1	Q96GC9	406 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	HES7	Q9BYE0	225 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	CDCP1	Q9H5V8	836 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ACTR8	Q9H981	624 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	PNO1	Q9NRX1	252 aa	Known RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ZNF358	Q9NW07	568 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	ZNF223	Q9UK11	482 aa	Predicted RBP	15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	TMCO1	Q9UM00	188 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	PCDHGA11	Q9Y5H2	935 aa		15.41	■□□□□ 0.06
CIRBP-204	ENST00000585630	EXOC1L	A0A1B0GW35	172 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	TRIM49D1	C9J1S8	452 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	POC1B-GALNT4	F8VUJ3	575 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630		H0YIV9	168 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	SIX3	O95343	332 aa	Predicted RBP	15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	TGFB1	P01137	390 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	STS	P08842	583 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	RBP1	P09455	135 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	COL6A2	P12110	1019 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	CD46	P15529	392 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	ST13	P50502	369 aa	Known RBP	15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	CLCN2	P51788	898 aa		15.4	■□□□□ 0.06
CIRBP-204	ENST00000585630	MLF1	P58340	268 aa		15.4	■□□□□ 0.06

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