RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 STSP08842 583 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 TPP2P29144 1249 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-209ENST00000585096 CYB561P49447 251 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 SERPINB9P50453 376 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 CLCN2P51788 898 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 MLF1P58340 268 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 AP5B1Q2VPB7 878 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 GRHL2Q6ISB3 625 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 MYLK4Q86YV6 388 aaPredicted RBP16.71■□□□□ 0.27
SRSF1-209ENST00000585096 OR7G3Q8NG95 312 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 SLC44A1Q8WWI5 657 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 CMTM7Q96FZ5 175 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 SCMH1Q96GD3 660 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 CENPKQ9BS16 269 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 KLHL1Q9NR64 748 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 SEC14L3Q9UDX4 400 aa16.71■□□□□ 0.27
SRSF1-209ENST00000585096 SCN3AQ9NY46 2000 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 SPTAN1Q13813 2472 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 CYR61O00622 381 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 FCHO1O14526 889 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 KLK8O60259 260 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 MLYCDO95822 493 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 TGFB1P01137 390 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 SP1P08047 785 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 ATP5A1P25705 553 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 PIK3CGP48736 1102 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 HNRNPFP52597 415 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 KCNK10P57789 538 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 STX4Q12846 297 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 PCBP2Q15366 365 aaKnown RBP eCLIP16.7■□□□□ 0.268e-10■■□□□ 12.9
SRSF1-209ENST00000585096 KHDRBS2Q5VWX1 349 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 LIPJQ5W064 366 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 SLC25A25Q6KCM7 469 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 METTL2BQ6P1Q9 378 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 UBE3DQ7Z6J8 389 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 ACOT4Q8N9L9 421 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 FAM98AQ8NCA5 519 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 TMEM52Q8NDY8 209 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 C7orf57Q8NEG2 295 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 KIF18AQ8NI77 898 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 REPS1Q96D71 796 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 VMP1Q96GC9 406 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 GPR78Q96P69 363 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 CCDC77Q9BR77 488 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 ACTR8Q9H981 624 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 ADAP2Q9NPF8 381 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 PPIEQ9UNP9 301 aaKnown RBP16.7■□□□□ 0.26
SRSF1-209ENST00000585096 PCDHGA11Q9Y5H2 935 aa16.7■□□□□ 0.26
SRSF1-209ENST00000585096 TRBV11-1A0A0K0K1C0 115 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 UGDHO60701 494 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 KRT38O76015 456 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 NEURL1O76050 574 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 UNC5CO95185 931 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 IFNA16P05015 189 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 RBP1P09455 135 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 HIST1H1TP22492 207 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 CNTFP26441 200 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 MST1P26927 711 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 TRHRP34981 398 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 PIK3CBP42338 1070 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 ST13P50502 369 aaKnown RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 HLCSP50747 726 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 PHEXP78562 749 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 RBPJQ06330 500 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 ELAVL1Q15717 326 aaKnown RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.69■□□□□ 0.262e-8■■■□□ 14.7
SRSF1-209ENST00000585096 UBAP2Q5T6F2 1119 aaKnown RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 DEPDC1Q5TB30 811 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 MAMDC2Q7Z304 686 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 CLNKQ7Z7G1 428 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 ARMC10Q8N2F6 343 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 TMEM132CQ8N3T6 1108 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 APCDD1LQ8NCL9 501 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 CSF3RQ99062 836 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 PAFAH2Q99487 392 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 TRIM45Q9H8W5 580 aaPredicted RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 KCMF1Q9P0J7 381 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 CPSF2Q9P2I0 782 aaKnown RBP16.69■□□□□ 0.26
SRSF1-209ENST00000585096 FBXW2Q9UKT8 454 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 TMCO1Q9UM00 188 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 TSC22D4Q9Y3Q8 395 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 CLDN16Q9Y5I7 305 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 CLCA3PQ9Y6N3 262 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 MAST4O15021 2626 aa16.69■□□□□ 0.26
SRSF1-209ENST00000585096 A0A087WUV0 522 aaPredicted RBP16.68■□□□□ 0.26
SRSF1-209ENST00000585096 TGFBR3LH3BV60 316 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 RTCAO00442 366 aaKnown RBP16.68■□□□□ 0.26
SRSF1-209ENST00000585096 SH3BGRLO75368 114 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 SLC25A12O75746 678 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 SCELO95171 688 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 ECHS1P30084 290 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 PPP2R1BP30154 601 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 SSR2P43308 183 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 RAP1GDS1P52306 607 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 PMP22Q01453 160 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 DDX39BQ13838 428 aaKnown RBP16.68■□□□□ 0.26
SRSF1-209ENST00000585096 GTF2H2Q13888 395 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 SERTAD2Q14140 314 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 MAPKAPK3Q16644 382 aa16.68■□□□□ 0.26
SRSF1-209ENST00000585096 OR4C11Q6IEV9 310 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms